RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 CPLX1O14810 134 aa28.12■■■□□ 2.09
TPR-202ENST00000451586 CFBP00751 764 aa28.12■■■□□ 2.09
TPR-202ENST00000451586 CACNB2Q08289 660 aaPredicted RBP28.12■■■□□ 2.09
TPR-202ENST00000451586 HEATR3Q7Z4Q2 680 aa28.12■■■□□ 2.09
TPR-202ENST00000451586 TINF2Q9BSI4 451 aa28.12■■■□□ 2.09
TPR-202ENST00000451586 SLC26A6Q9BXS9 759 aa28.12■■■□□ 2.09
TPR-202ENST00000451586 LIMCH1Q9UPQ0 1083 aa28.12■■■□□ 2.09
TPR-202ENST00000451586 WWC2Q6AWC2 1192 aa28.11■■■□□ 2.09
TPR-202ENST00000451586 SYTL5Q8TDW5 730 aaPredicted RBP28.11■■■□□ 2.09
TPR-202ENST00000451586 MAF1Q9H063 256 aa28.11■■■□□ 2.09
TPR-202ENST00000451586 HTTP42858 3142 aa28.11■■■□□ 2.09
TPR-202ENST00000451586 LCTP09848 1927 aa28.1■■■□□ 2.09
TPR-202ENST00000451586 PRKAR2AP13861 404 aaKnown RBP28.1■■■□□ 2.09
TPR-202ENST00000451586 AKAP17AQ02040 695 aaKnown RBP28.1■■■□□ 2.09
TPR-202ENST00000451586 MAP3K21Q5TCX8 1036 aa28.1■■■□□ 2.09
TPR-202ENST00000451586 CPLX2Q6PUV4 134 aaKnown RBP28.1■■■□□ 2.09
TPR-202ENST00000451586 ZNF467Q7Z7K2 595 aaPredicted RBP28.1■■■□□ 2.09
TPR-202ENST00000451586 RNF26Q9BY78 433 aaPredicted RBP28.1■■■□□ 2.09
TPR-202ENST00000451586 UNC93B1Q9H1C4 597 aa28.1■■■□□ 2.09
TPR-202ENST00000451586 ASTN1O14525 1302 aa28.1■■■□□ 2.09
TPR-202ENST00000451586 CCDC85CA6NKD9 419 aa28.09■■■□□ 2.09
TPR-202ENST00000451586 SSRP1Q08945 709 aaKnown RBP28.09■■■□□ 2.09
TPR-202ENST00000451586 PKN1Q16512 942 aa28.09■■■□□ 2.09
TPR-202ENST00000451586 PFKFB3Q16875 520 aaPredicted RBP28.09■■■□□ 2.09
TPR-202ENST00000451586 PRAMEF19Q5SWL8 479 aa28.09■■■□□ 2.09
TPR-202ENST00000451586 MAMDC4Q6UXC1 1216 aa28.09■■■□□ 2.09
TPR-202ENST00000451586 COL20A1Q9P218 1284 aa28.09■■■□□ 2.09
TPR-202ENST00000451586 ST18O60284 1047 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 DTNBO60941 627 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 CCL5P13501 91 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 SCG2P13521 617 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 HOXA13P31271 388 aaPredicted RBP28.08■■■□□ 2.09
TPR-202ENST00000451586 HSD17B4P51659 736 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 GHRHRQ02643 423 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 TYW1BQ6NUM6 668 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 MSL3Q8N5Y2 521 aaKnown RBP28.08■■■□□ 2.09
TPR-202ENST00000451586 GTF3C6Q969F1 213 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 TAAR1Q96RJ0 339 aa28.08■■■□□ 2.09
TPR-202ENST00000451586 RBM27Q9P2N5 1060 aaKnown RBP28.08■■■□□ 2.09
TPR-202ENST00000451586 DDX49Q9Y6V7 483 aaKnown RBP28.08■■■□□ 2.09
TPR-202ENST00000451586 GCOM1H8Y6P7 765 aaPredicted RBP28.07■■■□□ 2.08
TPR-202ENST00000451586 STXBP3O00186 592 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 SNAI1O95863 264 aaPredicted RBP28.07■■■□□ 2.08
TPR-202ENST00000451586 POLR2MP0CAP2 368 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 TRIM22Q8IYM9 498 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 SAMD3Q8N6K7 520 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 TRPV1Q8NER1 839 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 RNF208Q9H0X6 261 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 MAP3K20Q9NYL2 800 aaKnown RBP28.07■■■□□ 2.08
TPR-202ENST00000451586 ADD3Q9UEY8 706 aaKnown RBP28.07■■■□□ 2.08
TPR-202ENST00000451586 RPTORQ8N122 1335 aa28.07■■■□□ 2.08
TPR-202ENST00000451586 RBBP6Q7Z6E9 1792 aaKnown RBP28.06■■■□□ 2.08
TPR-202ENST00000451586 CTDNEP1O95476 244 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 CCND3P30281 292 aaPredicted RBP28.06■■■□□ 2.08
TPR-202ENST00000451586 ALDH5A1P51649 535 aaPredicted RBP28.06■■■□□ 2.08
TPR-202ENST00000451586 NAPAP54920 295 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 ARMCX2Q7L311 632 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 ZSCAN31Q96LW9 406 aaPredicted RBP28.06■■■□□ 2.08
TPR-202ENST00000451586 PSTPIP2Q9H939 334 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 HMX1Q9NP08 348 aaPredicted RBP28.06■■■□□ 2.08
TPR-202ENST00000451586 BARHL2Q9NY43 387 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 SYNGAP1Q96PV0 1343 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 MCM3APO60318 1980 aa28.06■■■□□ 2.08
TPR-202ENST00000451586 ASB14A6NK59 587 aa28.05■■■□□ 2.08
TPR-202ENST00000451586 hCG_1984214I3L0E3 225 aa28.05■■■□□ 2.08
TPR-202ENST00000451586 CDKL5O76039 1030 aa28.05■■■□□ 2.08
TPR-202ENST00000451586 ST3GAL1Q11201 340 aa28.05■■■□□ 2.08
TPR-202ENST00000451586 USP17L6PQ6QN14 398 aa28.05■■■□□ 2.08
TPR-202ENST00000451586 ZNF713Q8N859 430 aaPredicted RBP28.05■■■□□ 2.08
TPR-202ENST00000451586 IL27Q8NEV9 243 aa28.05■■■□□ 2.08
TPR-202ENST00000451586 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.05■■■□□ 2.08
TPR-202ENST00000451586 CD2BP2O95400 341 aaKnown RBP28.04■■■□□ 2.08
TPR-202ENST00000451586 CYBAP13498 195 aa28.04■■■□□ 2.08
TPR-202ENST00000451586 FCHSD1Q86WN1 690 aa28.04■■■□□ 2.08
TPR-202ENST00000451586 DNERQ8NFT8 737 aa28.04■■■□□ 2.08
TPR-202ENST00000451586 TMEM106CQ9BVX2 250 aa28.04■■■□□ 2.08
TPR-202ENST00000451586 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.04■■■□□ 2.08
TPR-202ENST00000451586 MEIS2O14770 477 aa28.03■■■□□ 2.08
TPR-202ENST00000451586 SMARCC2Q8TAQ2 1214 aa28.03■■■□□ 2.08
TPR-202ENST00000451586 CUL5Q93034 780 aa28.03■■■□□ 2.08
TPR-202ENST00000451586 RMDN3Q96TC7 470 aa28.03■■■□□ 2.08
TPR-202ENST00000451586 CNPY2Q9Y2B0 182 aa28.03■■■□□ 2.08
TPR-202ENST00000451586 SMCO2A6NFE2 343 aa28.02■■■□□ 2.08
TPR-202ENST00000451586 DEXIO95424 95 aa28.02■■■□□ 2.08
TPR-202ENST00000451586 CNGA1P29973 690 aa28.02■■■□□ 2.08
TPR-202ENST00000451586 PPP1R18Q6NYC8 613 aa28.02■■■□□ 2.08
TPR-202ENST00000451586 CCDC83Q8IWF9 413 aa28.02■■■□□ 2.08
TPR-202ENST00000451586 MORC4Q8TE76 937 aa28.02■■■□□ 2.08
TPR-202ENST00000451586 NSUN6Q8TEA1 469 aaKnown RBP28.02■■■□□ 2.08
TPR-202ENST00000451586 PAK6Q9NQU5 681 aaPredicted RBP28.02■■■□□ 2.08
TPR-202ENST00000451586 SH2B1Q9NRF2 756 aaPredicted RBP28.02■■■□□ 2.08
TPR-202ENST00000451586 PIK3CDO00329 1044 aa28.01■■■□□ 2.07
TPR-202ENST00000451586 ZNF865P0CJ78 1059 aaPredicted RBP28.01■■■□□ 2.07
TPR-202ENST00000451586 ARHGEF16Q5VV41 709 aa28.01■■■□□ 2.07
TPR-202ENST00000451586 AIFM3Q96NN9 605 aa28.01■■■□□ 2.07
TPR-202ENST00000451586 NRBP1Q9UHY1 535 aa28.01■■■□□ 2.07
TPR-202ENST00000451586 LOC102724159A0A0B4J2E5 919 aa28■■■□□ 2.07
TPR-202ENST00000451586 EIF2AK2P19525 551 aaKnown RBP28■■■□□ 2.07
TPR-202ENST00000451586 ACVR2BQ13705 512 aa28■■■□□ 2.07
TPR-202ENST00000451586 PWP2Q15269 919 aaKnown RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms