RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 LAMA4Q16363 1823 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 SMPD1P17405 629 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 CDK7P50613 346 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 NKX3-2P78367 333 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 ANKRD33Q7Z3H0 272 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 ANKS1AQ92625 1134 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 ASB2Q96Q27 587 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 CDH23Q9H251 3354 aa19.28■□□□□ 0.68
RPUSD3-209ENST00000451405 IMMTQ16891 758 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 NOL8Q76FK4 1167 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 FBXO16Q8IX29 292 aaPredicted RBP19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 PCSK9Q8NBP7 692 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 PNMA1Q8ND90 353 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 ADAMTS19Q8TE59 1207 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 MORC4Q8TE76 937 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 GLT1D1Q96MS3 346 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 TOX2Q96NM4 488 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 ZSCAN10Q96SZ4 725 aaPredicted RBP19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 THEGQ9P2T0 379 aa19.27■□□□□ 0.68
RPUSD3-209ENST00000451405 ELP1O95163 1332 aa19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 PTPDC1A2A3K4 754 aa19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 DYNC1LI2O43237 492 aaPredicted RBP19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 PLA2G5P39877 138 aa19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 MRPS5P82675 430 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 ENAHQ8N8S7 591 aaPredicted RBP19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 VTI1AQ96AJ9 217 aa19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 CTNNA3Q9UI47 895 aa19.26■□□□□ 0.67
RPUSD3-209ENST00000451405 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 IGFBP4P22692 258 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 CALML3P27482 149 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 ALDH5A1P51649 535 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 CCDC85BQ15834 202 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 CCDC178Q5BJE1 867 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 IQSEC1Q6DN90 963 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 KIAA1211Q6ZU35 1233 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 IQCA1Q86XH1 822 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 UHRF1Q96T88 793 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 PRDM12Q9H4Q4 367 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 KAT14Q9H8E8 782 aa19.25■□□□□ 0.67
RPUSD3-209ENST00000451405 ARVCFO00192 962 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 TIMP1P01033 207 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 RPS6P62753 249 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 PTH1RQ03431 593 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 TBC1D5Q92609 795 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 VTA1Q9NP79 307 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 TNKSO95271 1327 aa19.24■□□□□ 0.67
RPUSD3-209ENST00000451405 A0A0U1RQG5 324 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 CHMLP26374 656 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 NT5C2P49902 561 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 PPIGQ13427 754 aaKnown RBP eCLIP19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 FSCN1Q16658 493 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 USH1GQ495M9 461 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 CYB5R4Q7L1T6 521 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 ADGRF4Q8IZF3 695 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.23■□□□□ 0.678e-7■■■■■ 32.7
RPUSD3-209ENST00000451405 KRT23Q9C075 422 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 MSRAQ9UJ68 235 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 TBX21Q9UL17 535 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 GRIN2DO15399 1336 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
RPUSD3-209ENST00000451405 PBX2P40425 430 aa19.22■□□□□ 0.67
RPUSD3-209ENST00000451405 PBX4Q9BYU1 374 aa19.22■□□□□ 0.67
RPUSD3-209ENST00000451405 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
RPUSD3-209ENST00000451405 VAT1LQ9HCJ6 419 aa19.22■□□□□ 0.67
RPUSD3-209ENST00000451405 MUC3AQ02505 3323 aa19.22■□□□□ 0.67
RPUSD3-209ENST00000451405 RBM47A0AV96 593 aaKnown RBP19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 GRXCR1A8MXD5 290 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 SEC23AQ15436 765 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 CDC37Q16543 378 aaPredicted RBP19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 DUSP28Q4G0W2 176 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 MFSD5Q6N075 450 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 FAM126BQ8IXS8 530 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 STAG2Q8N3U4 1231 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 SLC43A3Q8NBI5 491 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 CNNM2Q9H8M5 875 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 PNMA2Q9UL42 364 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 Q9Y3F1 56 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 TAF6LQ9Y6J9 622 aa19.21■□□□□ 0.67
RPUSD3-209ENST00000451405 CYP21A2P08686 494 aa19.2■□□□□ 0.66
RPUSD3-209ENST00000451405 EDNRBP24530 442 aa19.2■□□□□ 0.66
RPUSD3-209ENST00000451405 TMEM199Q8N511 208 aa19.2■□□□□ 0.66
RPUSD3-209ENST00000451405 RGS22Q8NE09 1264 aa19.2■□□□□ 0.66
RPUSD3-209ENST00000451405 WDR11Q9BZH6 1224 aa19.2■□□□□ 0.66
RPUSD3-209ENST00000451405 JMJD4Q9H9V9 463 aa19.2■□□□□ 0.66
RPUSD3-209ENST00000451405 LOC102724159A0A0B4J2E5 919 aa19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 CD4P01730 458 aa19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 PSMC6P62333 389 aa19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 PWP2Q15269 919 aaKnown RBP19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 QRICH1Q2TAL8 776 aa19.19■□□□□ 0.66
RPUSD3-209ENST00000451405 ASPRV1Q53RT3 343 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms