RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RNF207Q6ZRF8 634 aa31.83■■■□□ 2.69
USP42-204ENST00000451154 C16orf59Q7L2K0 433 aa31.83■■■□□ 2.69
USP42-204ENST00000451154 SLC43A3Q8NBI5 491 aa31.83■■■□□ 2.69
USP42-204ENST00000451154 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.83■■■□□ 2.69
USP42-204ENST00000451154 PPP1R12CQ9BZL4 782 aa31.83■■■□□ 2.69
USP42-204ENST00000451154 GRIN2DO15399 1336 aa31.82■■■□□ 2.68
USP42-204ENST00000451154 EYSQ5T1H1 3165 aa31.82■■■□□ 2.68
USP42-204ENST00000451154 HIP1O00291 1037 aa31.82■■■□□ 2.68
USP42-204ENST00000451154 WDR11Q9BZH6 1224 aa31.82■■■□□ 2.68
USP42-204ENST00000451154 PNMA2Q9UL42 364 aa31.82■■■□□ 2.68
USP42-204ENST00000451154 B4E1Z4 1266 aa31.81■■■□□ 2.68
USP42-204ENST00000451154 CSF2RAP15509 400 aa31.81■■■□□ 2.68
USP42-204ENST00000451154 PPIGQ13427 754 aaKnown RBP eCLIP31.81■■■□□ 2.68
USP42-204ENST00000451154 DUSP28Q4G0W2 176 aa31.81■■■□□ 2.68
USP42-204ENST00000451154 CYP2C18P33260 490 aa31.8■■■□□ 2.68
USP42-204ENST00000451154 PSMC6P62333 389 aa31.8■■■□□ 2.68
USP42-204ENST00000451154 RPS6P62753 249 aaKnown RBP31.8■■■□□ 2.68
USP42-204ENST00000451154 GPATCH4Q5T3I0 446 aaKnown RBP31.8■■■□□ 2.68
USP42-204ENST00000451154 IQCA1Q86XH1 822 aa31.8■■■□□ 2.68
USP42-204ENST00000451154 TMEM199Q8N511 208 aa31.8■■■□□ 2.68
USP42-204ENST00000451154 PNMA1Q8ND90 353 aa31.8■■■□□ 2.68
USP42-204ENST00000451154 DSCC1Q9BVC3 393 aa31.8■■■□□ 2.68
USP42-204ENST00000451154 CDH23Q9H251 3354 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 CUL9Q8IWT3 2517 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.79■■■□□ 2.68
USP42-204ENST00000451154 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.79■■■□□ 2.68
USP42-204ENST00000451154 ACRP10323 421 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 USH1GQ495M9 461 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 CCDC178Q5BJE1 867 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 TMEM240Q5SV17 173 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 KAT14Q9H8E8 782 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 ZSWIM5Q9P217 1185 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 PRUNE2Q8WUY3 3088 aa31.79■■■□□ 2.68
USP42-204ENST00000451154 WDR19Q8NEZ3 1342 aa31.78■■■□□ 2.68
USP42-204ENST00000451154 LOC102724159A0A0B4J2E5 919 aa31.78■■■□□ 2.68
USP42-204ENST00000451154 PWP2Q15269 919 aaKnown RBP31.78■■■□□ 2.68
USP42-204ENST00000451154 ANKS1AQ92625 1134 aa31.78■■■□□ 2.68
USP42-204ENST00000451154 ZSCAN10Q96SZ4 725 aaPredicted RBP31.78■■■□□ 2.68
USP42-204ENST00000451154 TRPV6Q9H1D0 765 aa31.78■■■□□ 2.68
USP42-204ENST00000451154 SUPT16HQ9Y5B9 1047 aaKnown RBP31.78■■■□□ 2.68
USP42-204ENST00000451154 RBM47A0AV96 593 aaKnown RBP31.77■■■□□ 2.68
USP42-204ENST00000451154 IMMTQ16891 758 aaKnown RBP31.77■■■□□ 2.68
USP42-204ENST00000451154 MYLIPQ8WY64 445 aa31.77■■■□□ 2.68
USP42-204ENST00000451154 CTNNA3Q9UI47 895 aa31.77■■■□□ 2.68
USP42-204ENST00000451154 LAMA4Q16363 1823 aa31.77■■■□□ 2.68
USP42-204ENST00000451154 PDE4DQ08499 809 aa31.76■■■□□ 2.67
USP42-204ENST00000451154 ZNF365Q70YC5 407 aa31.76■■■□□ 2.67
USP42-204ENST00000451154 ENAHQ8N8S7 591 aaPredicted RBP31.76■■■□□ 2.67
USP42-204ENST00000451154 IL25Q9H293 177 aa31.76■■■□□ 2.67
USP42-204ENST00000451154 NT5C2P49902 561 aa31.75■■■□□ 2.67
USP42-204ENST00000451154 ADGRF4Q8IZF3 695 aa31.75■■■□□ 2.67
USP42-204ENST00000451154 TBC1D5Q92609 795 aa31.75■■■□□ 2.67
USP42-204ENST00000451154 HIPK3Q9H422 1215 aa31.75■■■□□ 2.67
USP42-204ENST00000451154 UMODL1Q5DID0 1318 aa31.75■■■□□ 2.67
USP42-204ENST00000451154 B4GALT4O60513 344 aa31.74■■■□□ 2.67
USP42-204ENST00000451154 PDE4AP27815 886 aa31.74■■■□□ 2.67
USP42-204ENST00000451154 CDC37Q16543 378 aaPredicted RBP31.74■■■□□ 2.67
USP42-204ENST00000451154 DNERQ8NFT8 737 aa31.74■■■□□ 2.67
USP42-204ENST00000451154 SEZ6LQ9BYH1 1024 aa31.74■■■□□ 2.67
USP42-204ENST00000451154 EDNRBP24530 442 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 DNAJB2P25686 324 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 RGS22Q8NE09 1264 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 OR6J1Q8NGC5 347 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 MPHOSPH6Q99547 160 aaKnown RBP31.73■■■□□ 2.67
USP42-204ENST00000451154 KRT23Q9C075 422 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 VAT1LQ9HCJ6 419 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 TNKSO95271 1327 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 MYO9BQ13459 2157 aa31.73■■■□□ 2.67
USP42-204ENST00000451154 GRXCR1A8MXD5 290 aa31.72■■■□□ 2.67
USP42-204ENST00000451154 MYL3P08590 195 aa31.72■■■□□ 2.67
USP42-204ENST00000451154 CCL23P55773 120 aa31.72■■■□□ 2.67
USP42-204ENST00000451154 COPS5Q92905 334 aa31.72■■■□□ 2.67
USP42-204ENST00000451154 IL23AQ9NPF7 189 aa31.72■■■□□ 2.67
USP42-204ENST00000451154 RASIP1Q5U651 963 aa31.71■■■□□ 2.67
USP42-204ENST00000451154 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.71■■■□□ 2.67
USP42-204ENST00000451154 MAFAQ8NHW3 353 aaPredicted RBP31.71■■■□□ 2.67
USP42-204ENST00000451154 NOC4LQ9BVI4 516 aaKnown RBP31.71■■■□□ 2.67
USP42-204ENST00000451154 POLR3EQ9NVU0 708 aa31.71■■■□□ 2.67
USP42-204ENST00000451154 TMEM265A0A087WTH1 108 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 CPT1AP50416 773 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 PURAQ00577 322 aaKnown RBP31.7■■■□□ 2.67
USP42-204ENST00000451154 PPP2R5BQ15173 497 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 ASPRV1Q53RT3 343 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 PSRC1Q6PGN9 363 aaPredicted RBP31.7■■■□□ 2.67
USP42-204ENST00000451154 SCFD2Q8WU76 684 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 UBAC1Q9BSL1 405 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 ALDH8A1Q9H2A2 487 aaPredicted RBP31.7■■■□□ 2.67
USP42-204ENST00000451154 CNNM2Q9H8M5 875 aa31.7■■■□□ 2.67
USP42-204ENST00000451154 B4DLN1 442 aa31.69■■■□□ 2.66
USP42-204ENST00000451154 PARP1P09874 1014 aaKnown RBP31.69■■■□□ 2.66
USP42-204ENST00000451154 GSPT1P15170 499 aaKnown RBP31.69■■■□□ 2.66
USP42-204ENST00000451154 MRPL12P52815 198 aaKnown RBP31.69■■■□□ 2.66
USP42-204ENST00000451154 GRIN2CQ14957 1233 aa31.69■■■□□ 2.66
USP42-204ENST00000451154 QRICH1Q2TAL8 776 aa31.69■■■□□ 2.66
USP42-204ENST00000451154 TIFAQ96CG3 184 aa31.69■■■□□ 2.66
USP42-204ENST00000451154 TAAR1Q96RJ0 339 aa31.69■■■□□ 2.66
USP42-204ENST00000451154 GPHNQ9NQX3 736 aaPredicted RBP31.69■■■□□ 2.66
USP42-204ENST00000451154 ABCB11O95342 1321 aa31.69■■■□□ 2.66
USP42-204ENST00000451154 DHX16O60231 1041 aaKnown RBP31.68■■■□□ 2.66
USP42-204ENST00000451154 FGBP02675 491 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms