RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PURBQ96QR8 312 aaKnown RBP15.01□□□□□ -0.01
VPS33A-202ENST00000451053 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
VPS33A-202ENST00000451053 VPS54Q9P1Q0 977 aa15.01□□□□□ -0.01
VPS33A-202ENST00000451053 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.01□□□□□ -0.01
VPS33A-202ENST00000451053 PCNTO95613 3336 aa15.01□□□□□ -0.01
VPS33A-202ENST00000451053 LCTP09848 1927 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 PFASO15067 1338 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 CFBP00751 764 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 CALML3P27482 149 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
VPS33A-202ENST00000451053 PPP1R18Q6NYC8 613 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 RNF207Q6ZRF8 634 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 DPP9Q86TI2 863 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 MCF2L2Q86YR7 1114 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 FGD4Q96M96 766 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 APBA2Q99767 749 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 PTPN22Q9Y2R2 807 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
VPS33A-202ENST00000451053 ZNFX1Q9P2E3 1918 aaKnown RBP15□□□□□ -0.01
VPS33A-202ENST00000451053 POTEB2H3BUK9 544 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 HOXC6P09630 235 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 HSD17B4P51659 736 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 PRMT2P55345 433 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 GHRHRQ02643 423 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 CCL14Q16627 93 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 ZNF792Q3KQV3 632 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 FAM133AQ8N9E0 248 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 SYTL5Q8TDW5 730 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-202ENST00000451053 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 PSTPIP2Q9H939 334 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 COL20A1Q9P218 1284 aa14.99□□□□□ -0.01
VPS33A-202ENST00000451053 ASTN1O14525 1302 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 PLXNA1Q9UIW2 1896 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 SOWAHBA6NEL2 793 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 SMCO2A6NFE2 343 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 GCOM1H8Y6P7 765 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-202ENST00000451053 MEIS2O14770 477 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 ADAMTS3O15072 1205 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 POLR2MP0CAP2 368 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 ADCY7P51828 1080 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 FOSBP53539 338 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 HMGN5P82970 282 aaKnown RBP14.98□□□□□ -0.01
VPS33A-202ENST00000451053 IRF5Q13568 498 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 UBE2SQ16763 222 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 USP17L6PQ6QN14 398 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 RAET1EQ8TD07 263 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 WASF1Q92558 559 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 SH3GLB2Q9NR46 395 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 GJB4Q9NTQ9 266 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 FLRT1Q9NZU1 646 aa14.98□□□□□ -0.01
VPS33A-202ENST00000451053 ESYT2A0FGR8 921 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 ADCY3O60266 1144 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 XRCC5P13010 732 aaKnown RBP14.97□□□□□ -0.01
VPS33A-202ENST00000451053 ELNP15502 786 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 CCDC12Q8WUD4 166 aaPredicted RBP14.97□□□□□ -0.01
VPS33A-202ENST00000451053 TRIB2Q92519 343 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 CUL5Q93034 780 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 MAML3Q96JK9 1138 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 TAAR1Q96RJ0 339 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 MAF1Q9H063 256 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 ZMYND12Q9H0C1 365 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 SLC5A4Q9NY91 659 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 KCNJ14Q9UNX9 436 aa14.97□□□□□ -0.01
VPS33A-202ENST00000451053 DDX49Q9Y6V7 483 aaKnown RBP14.97□□□□□ -0.01
VPS33A-202ENST00000451053 PIK3CDO00329 1044 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 GJB2P29033 226 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 NLRP5P59047 1200 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 NPY5RQ15761 445 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-202ENST00000451053 FCHSD1Q86WN1 690 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 SAMD3Q8N6K7 520 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 MAP3K20Q9NYL2 800 aaKnown RBP14.96□□□□□ -0.01
VPS33A-202ENST00000451053 SMC3Q9UQE7 1217 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 DIS3Q9Y2L1 958 aaKnown RBP14.96□□□□□ -0.01
VPS33A-202ENST00000451053 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
VPS33A-202ENST00000451053 IGHA2P01877 340 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 ALDH5A1P51649 535 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-202ENST00000451053 MRPL12P52815 198 aaKnown RBP14.95□□□□□ -0.02
VPS33A-202ENST00000451053 TRIM32Q13049 653 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 OLFML2BQ68BL8 750 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 FAM184AQ8NB25 1140 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 PXYLP1Q8TE99 480 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 PHF20Q9BVI0 1012 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 C6orf50Q9HD87 102 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 TMEM260Q9NX78 707 aa14.95□□□□□ -0.02
VPS33A-202ENST00000451053 PDIA4P13667 645 aaKnown RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 XBP1P17861 261 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 GNA11P29992 359 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 GRK4P32298 578 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 CYP2C19P33261 490 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 CLK2P49760 499 aaKnown RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 UBXN2AP68543 259 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 PKN2Q16513 984 aaKnown RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 FAM177A1Q8N128 213 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-202ENST00000451053 SPRYD3Q8NCJ5 442 aa14.94□□□□□ -0.02
VPS33A-202ENST00000451053 SLAIN1Q8ND83 568 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms