RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 RBM25P49756 843 aaKnown RBP16.63■□□□□ 0.25
COL3A1-203ENST00000450867 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
COL3A1-203ENST00000450867 HSD17B4P51659 736 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
COL3A1-203ENST00000450867 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 MCF2L2Q86YR7 1114 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 U2AF1L4Q8WU68 220 aaKnown RBP16.63■□□□□ 0.25
COL3A1-203ENST00000450867 ZNF274Q96GC6 653 aaPredicted RBP16.63■□□□□ 0.25
COL3A1-203ENST00000450867 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 TNRC18O15417 2968 aaPredicted RBP16.63■□□□□ 0.25
COL3A1-203ENST00000450867 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
COL3A1-203ENST00000450867 ASB14A6NK59 587 aa16.62■□□□□ 0.25
COL3A1-203ENST00000450867 SNAI1O95863 264 aaPredicted RBP16.62■□□□□ 0.25
COL3A1-203ENST00000450867 LHX8Q68G74 356 aa16.62■□□□□ 0.25
COL3A1-203ENST00000450867 CMTR1Q8N1G2 835 aaKnown RBP16.62■□□□□ 0.25
COL3A1-203ENST00000450867 DNERQ8NFT8 737 aa16.62■□□□□ 0.25
COL3A1-203ENST00000450867 KATNBL1Q9H079 304 aa16.62■□□□□ 0.25
COL3A1-203ENST00000450867 ADD3Q9UEY8 706 aaKnown RBP16.62■□□□□ 0.25
COL3A1-203ENST00000450867 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
COL3A1-203ENST00000450867 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 SEPT4O43236 478 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 MSCO60682 206 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 ZNF865P0CJ78 1059 aaPredicted RBP16.61■□□□□ 0.25
COL3A1-203ENST00000450867 EDNRBP24530 442 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
COL3A1-203ENST00000450867 NTRK3Q16288 839 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 ARMCX2Q7L311 632 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 TEX2Q8IWB9 1127 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
COL3A1-203ENST00000450867 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 KIF2CQ99661 725 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 ABHD16BQ9H3Z7 469 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.61■□□□□ 0.25
COL3A1-203ENST00000450867 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
COL3A1-203ENST00000450867 hCG_1984214I3L0E3 225 aa16.6■□□□□ 0.25
COL3A1-203ENST00000450867 MYCP01106 439 aaPredicted RBP16.6■□□□□ 0.25
COL3A1-203ENST00000450867 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
COL3A1-203ENST00000450867 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
COL3A1-203ENST00000450867 UBE2Q1Q7Z7E8 422 aa16.6■□□□□ 0.25
COL3A1-203ENST00000450867 ZNF713Q8N859 430 aaPredicted RBP16.6■□□□□ 0.25
COL3A1-203ENST00000450867 ANKLE1Q8NAG6 615 aa16.6■□□□□ 0.25
COL3A1-203ENST00000450867 CNPY2Q9Y2B0 182 aa16.6■□□□□ 0.25
COL3A1-203ENST00000450867 MKI67P46013 3256 aaKnown RBP16.59■□□□□ 0.25
COL3A1-203ENST00000450867 CAPN15O75808 1086 aa16.59■□□□□ 0.25
COL3A1-203ENST00000450867 IFNAR1P17181 557 aa16.59■□□□□ 0.25
COL3A1-203ENST00000450867 EN2P19622 333 aaPredicted RBP16.59■□□□□ 0.25
COL3A1-203ENST00000450867 CALML3P27482 149 aa16.59■□□□□ 0.25
COL3A1-203ENST00000450867 PURBQ96QR8 312 aaKnown RBP16.59■□□□□ 0.25
COL3A1-203ENST00000450867 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
COL3A1-203ENST00000450867 COL20A1Q9P218 1284 aa16.59■□□□□ 0.25
COL3A1-203ENST00000450867 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
COL3A1-203ENST00000450867 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
COL3A1-203ENST00000450867 PIK3CDO00329 1044 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 AK2P54819 239 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 ACVR2BQ13705 512 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 IL27Q8NEV9 243 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 RNF26Q9BY78 433 aaPredicted RBP16.58■□□□□ 0.24
COL3A1-203ENST00000450867 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 FRMPD4Q14CM0 1322 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 ALPK3Q96L96 1907 aa16.58■□□□□ 0.24
COL3A1-203ENST00000450867 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
COL3A1-203ENST00000450867 PFKFB2O60825 505 aa16.57■□□□□ 0.24
COL3A1-203ENST00000450867 CFBP00751 764 aa16.57■□□□□ 0.24
COL3A1-203ENST00000450867 AKR1A1P14550 325 aa16.57■□□□□ 0.24
COL3A1-203ENST00000450867 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
COL3A1-203ENST00000450867 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
COL3A1-203ENST00000450867 MPHOSPH6Q99547 160 aaKnown RBP16.57■□□□□ 0.24
COL3A1-203ENST00000450867 NAP1L2Q9ULW6 460 aaPredicted RBP16.57■□□□□ 0.24
COL3A1-203ENST00000450867 V9GY48 417 aaPredicted RBP16.57■□□□□ 0.24
COL3A1-203ENST00000450867 hCG_1642624A0A1W2PR95 340 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 RBM47A0AV96 593 aaKnown RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 B4DLN1 442 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 POLR2MP0CAP2 368 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 NEK4P51957 841 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 PFKFB3Q16875 520 aaPredicted RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 WWC2Q6AWC2 1192 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 NSUN6Q8TEA1 469 aaKnown RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 TAAR1Q96RJ0 339 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
COL3A1-203ENST00000450867 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
COL3A1-203ENST00000450867 MEIS2O14770 477 aa16.55■□□□□ 0.24
COL3A1-203ENST00000450867 SCG2P13521 617 aa16.55■□□□□ 0.24
COL3A1-203ENST00000450867 CNGA1P29973 690 aa16.55■□□□□ 0.24
COL3A1-203ENST00000450867 NKX3-2P78367 333 aa16.55■□□□□ 0.24
COL3A1-203ENST00000450867 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
COL3A1-203ENST00000450867 PKN1Q16512 942 aa16.55■□□□□ 0.24
COL3A1-203ENST00000450867 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
COL3A1-203ENST00000450867 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms