RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LGSNQ5TDP6 509 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PRR23CQ6ZRP0 262 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 FAM43BQ6ZT52 329 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ANKRD35Q8N283 1001 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MINDY2Q8NBR6 621 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PROCA1Q8NCQ7 364 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 DDHD1Q8NEL9 900 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 HELBQ8NG08 1087 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 GSDMBQ8TAX9 411 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NSMCE1Q8WV22 266 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CPLX3Q8WVH0 158 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SIRT1Q96EB6 747 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TRIM47Q96LD4 638 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SIKE1Q9BRV8 207 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 FUT8Q9BYC5 575 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NACAP1Q9BZK3 213 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 FHDC1Q9C0D6 1143 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 MAGEF1Q9HAY2 307 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MRGBPQ9NV56 204 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 BTBD7Q9P203 1132 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ZMYND8Q9ULU4 1186 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 USP16Q9Y5T5 823 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MAST1Q9Y2H9 1570 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 PIK3R4Q99570 1358 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 SMIM31A0A1B0GVY4 71 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 NUTM2BA6NNL0 878 aaPredicted RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 NUTM2EB1AL46 878 aaPredicted RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8RI6L899 631 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 SMAPO00193 183 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 EXOC5O00471 708 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KPNA4O00629 521 aaPredicted RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 CHMP2AO43633 222 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 SH3BP5O60239 455 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 AP1G2O75843 785 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KRT38O76015 456 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 LCA5LO95447 670 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 PARNO95453 639 aaKnown RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 KRT8P05787 483 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 EEF1DP29692 281 aaKnown RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 FOSBP53539 338 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KRT76Q01546 638 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 ATP2B2Q01814 1243 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 TBL3Q12788 808 aaKnown RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 CETN1Q12798 172 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 CNGA3Q16281 694 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 WLSQ5T9L3 541 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 RRAGBQ5VZM2 374 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KRT80Q6KB66 452 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 DPY19L2Q6NUT2 758 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 TMTC3Q6ZXV5 915 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KRT27Q7Z3Y8 459 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 FERMT3Q86UX7 667 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 CTAGE3PQ8IX95 158 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KIAA2013Q8IYS2 634 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 KRI1Q8N9T8 703 aaKnown RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 WDR60Q8WVS4 1066 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 VTI1AQ96AJ9 217 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 LENG1Q96BZ8 264 aaPredicted RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 CRNKL1Q9BZJ0 848 aaKnown RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 IMPG2Q9BZV3 1241 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 TAF1DQ9H5J8 278 aaPredicted RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 MMRN2Q9H8L6 949 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 MOV10Q9HCE1 1003 aaKnown RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 ATG3Q9NT62 314 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 SYBUQ9NX95 663 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 ANKIB1Q9P2G1 1089 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 TSPYL4Q9UJ04 414 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 RAB21Q9UL25 225 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 AMOTL2Q9Y2J4 779 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 LRCH1Q9Y2L9 728 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 ARL2BPQ9Y2Y0 163 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 ZNF711Q9Y462 761 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 STK24Q9Y6E0 443 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 TRPM1Q7Z4N2 1603 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 DENND4BO75064 1496 aaPredicted RBP2.4□□□□□ -2.02
USP53-202ENST00000450251 ARHGAP23Q9P227 1491 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 RTL9Q8NET4 1388 aa2.4□□□□□ -2.02
USP53-202ENST00000450251 CCT8L1PA6NM43 557 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 GUCY1B2O75343 617 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 MMEP08473 750 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 RPS6KB1P23443 525 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CHMLP26374 656 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 TNFRSF8P28908 595 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 IRAK1P51617 712 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 RPL26P61254 145 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 STX1BP61266 288 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 DSG1Q02413 1049 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 GRIN1Q05586 938 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 DCTN2Q13561 401 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 R3HDM1Q15032 1099 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 TMEM266Q2M3C6 531 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 NANOGNBQ7Z5D8 188 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CCDC84Q86UT8 332 aaPredicted RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 ZBTB8BQ8NAP8 495 aaPredicted RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 ICA1LQ8NDH6 482 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CALML6Q8TD86 181 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CYFIP2Q96F07 1278 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 TRIM11Q96F44 468 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 KIF12Q96FN5 646 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 NAF1Q96HR8 494 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms