RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CALCRLQ16602 461 aa16.15■□□□□ 0.18
USP39-207ENST00000450066 IQUBQ8NA54 791 aa16.15■□□□□ 0.18
USP39-207ENST00000450066 CRYGNQ8WXF5 182 aa16.15■□□□□ 0.18
USP39-207ENST00000450066 DHX58Q96C10 678 aa16.15■□□□□ 0.18
USP39-207ENST00000450066 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
USP39-207ENST00000450066 ABCB11O95342 1321 aa16.15■□□□□ 0.18
USP39-207ENST00000450066 SPDYE3A6NKU9 549 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 SLC37A4O43826 429 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 ZNF165P49910 485 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 MAP3K9P80192 1104 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 POSTNQ15063 836 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
USP39-207ENST00000450066 LDHDQ86WU2 507 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.17
USP39-207ENST00000450066 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
USP39-207ENST00000450066 DDX25Q9UHL0 483 aaKnown RBP16.14■□□□□ 0.17
USP39-207ENST00000450066 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 CYP3A7-CYP3A51PA0A087WV96 503 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 FLOT1O75955 427 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.17
USP39-207ENST00000450066 CYP3A7P24462 503 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 PRKG1Q13976 671 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 E2F4Q16254 413 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 MOXD1Q6UVY6 613 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 DLK2Q6UY11 383 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.14■□□□□ 0.17
USP39-207ENST00000450066 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 CCSER1Q9C0I3 900 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
USP39-207ENST00000450066 ZNF536O15090 1300 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 FDX1P10109 184 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 SREBF1P36956 1147 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 UBA7P41226 1012 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 ARHGAP4P98171 946 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 NAT10Q9H0A0 1025 aaKnown RBP16.13■□□□□ 0.17
USP39-207ENST00000450066 SNCAIPQ9Y6H5 919 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 SCN4AP35499 1836 aa16.13■□□□□ 0.17
USP39-207ENST00000450066 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
USP39-207ENST00000450066 FOXN1O15353 648 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 HOXA13P31271 388 aaPredicted RBP16.12■□□□□ 0.17
USP39-207ENST00000450066 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
USP39-207ENST00000450066 HMGCS2P54868 508 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 NLRP12P59046 1061 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 VGLL4Q14135 290 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 NT5DC1Q5TFE4 455 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 C11orf57Q6ZUT1 292 aaPredicted RBP16.12■□□□□ 0.17
USP39-207ENST00000450066 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 MBOAT7Q96N66 472 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 TAF1DQ9H5J8 278 aaPredicted RBP16.12■□□□□ 0.17
USP39-207ENST00000450066 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 CCPG1Q9ULG6 757 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 PCDHA5Q9Y5H7 936 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 CDC25AP30304 524 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 TXKP42681 527 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 IREB2P48200 963 aaKnown RBP16.12■□□□□ 0.17
USP39-207ENST00000450066 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 LUZP1Q86V48 1076 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 RBM46Q8TBY0 533 aaKnown RBP16.12■□□□□ 0.17
USP39-207ENST00000450066 PAGE5Q96GU1 130 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 AGBL1Q96MI9 1066 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 PPP1R9BQ96SB3 815 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 DISC1Q9NRI5 854 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 CSADQ9Y600 493 aa16.12■□□□□ 0.17
USP39-207ENST00000450066 A0A087WWV3 80 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 CFBP00751 764 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 NF2P35240 595 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 TECP42680 631 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 PDIA5Q14554 519 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
USP39-207ENST00000450066 SPATA20Q8TB22 786 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 CDCA5Q96FF9 252 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 RAB34Q9BZG1 259 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 PAPPA2Q9BXP8 1791 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
USP39-207ENST00000450066 PP2D1A8MPX8 630 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 BIN1O00499 593 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 ZBED4O75132 1171 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 CYP3A4P08684 503 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 SARSP49591 514 aaKnown RBP16.1■□□□□ 0.17
USP39-207ENST00000450066 KARSQ15046 597 aaKnown RBP16.1■□□□□ 0.17
USP39-207ENST00000450066 IQCB1Q15051 598 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 DPCR1Q3MIW9 517 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 PDXDC2PQ6P474 469 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 HAS1Q92839 578 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 CCDC39Q9UFE4 941 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 POTECB2RU33 542 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 VWA5AO00534 786 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 SMC2O95347 1197 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 PRR29P0C7W0 189 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 CIITAP33076 1130 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms