RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
SYVN1-204ENST00000449943 FKBP15Q5T1M5 1219 aa12.63□□□□□ -0.39
SYVN1-204ENST00000449943 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
SYVN1-204ENST00000449943 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
SYVN1-204ENST00000449943 GOLGA5Q8TBA6 731 aa12.63□□□□□ -0.39
SYVN1-204ENST00000449943 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
SYVN1-204ENST00000449943 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
SYVN1-204ENST00000449943 CCNE1P24864 410 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 ACTN2P35609 894 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
SYVN1-204ENST00000449943 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
SYVN1-204ENST00000449943 SPA17Q15506 151 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
SYVN1-204ENST00000449943 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■□□□□ 8.8
SYVN1-204ENST00000449943 DEF6Q9H4E7 631 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 M0R2N6 131 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 LCMT1Q9UIC8 334 aa12.62□□□□□ -0.39
SYVN1-204ENST00000449943 RASSF10A6NK89 507 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
SYVN1-204ENST00000449943 C2CD5Q86YS7 1000 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 C10orf67Q8IYJ2 551 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 EHBP1Q8NDI1 1231 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 FAM71BQ8TC56 605 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 UBA5Q9GZZ9 404 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 MMRN2Q9H8L6 949 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 ZBED6P86452 979 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
SYVN1-204ENST00000449943 MUM1L1Q5H9M0 696 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 FOXR1Q6PIV2 292 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 FAM114A1Q8IWE2 563 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 NOC3LQ8WTT2 800 aaKnown RBP12.61□□□□□ -0.39
SYVN1-204ENST00000449943 SECISBP2LQ93073 1101 aaKnown RBP12.61□□□□□ -0.39
SYVN1-204ENST00000449943 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 RNF40O75150 1001 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 FLT1P17948 1338 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 TBCKQ8TEA7 893 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
SYVN1-204ENST00000449943 PDE2AO00408 941 aaPredicted RBP12.6□□□□□ -0.39
SYVN1-204ENST00000449943 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 C6orf50Q9HD87 102 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 PSD3Q9NYI0 1048 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 TRIM66O15016 1216 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 TUBBP07437 444 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 MAP9Q49MG5 647 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 NEK8Q86SG6 692 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 PIGSQ96S52 555 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 EYA3Q99504 573 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
SYVN1-204ENST00000449943 MYL1P05976 194 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 MEA1Q16626 185 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 PAPD7Q5XG87 772 aaKnown RBP12.6□□□□□ -0.39
SYVN1-204ENST00000449943 KRT25Q7Z3Z0 450 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
SYVN1-204ENST00000449943 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 TTYH3Q9C0H2 523 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
SYVN1-204ENST00000449943 LAD1O00515 517 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 MYBL2P10244 700 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 CXCR5P32302 372 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 DNA2P51530 1060 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 MIIPQ5JXC2 388 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 KIAA0895Q8NCT3 520 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 IFIH1Q9BYX4 1025 aaKnown RBP12.6□□□□□ -0.39
SYVN1-204ENST00000449943 TMEM51Q9NW97 253 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 SMARCAL1Q9NZC9 954 aa12.6□□□□□ -0.39
SYVN1-204ENST00000449943 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 TULP2O00295 520 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 MOCS3O95396 460 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 RASA1P20936 1047 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 AMPD3Q01432 767 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 GALNT17Q6IS24 598 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 DAGLBQ8NCG7 672 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 EPHB6O15197 1021 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 AKR1B10O60218 316 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms