RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 DYNC1LI2O43237 492 aaPredicted RBP20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 CYP21A2P08686 494 aa20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 IRX5P78411 483 aaPredicted RBP20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 FSCN1Q16658 493 aaKnown RBP20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 SLC30A10Q6XR72 485 aa20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 DDX49Q9Y6V7 483 aaKnown RBP20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 ABCB11O95342 1321 aa20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 ERICH2A1L162 156 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 CABYRO75952 493 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 RAG1P15918 1043 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 PDE4DQ08499 809 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 FAAP100Q0VG06 881 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 SEC23AQ15436 765 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 CYB5R4Q7L1T6 521 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 RALYLQ86SE5 291 aaKnown RBP20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 MCF2L2Q86YR7 1114 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 VAT1LQ9HCJ6 419 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 MCM3APO60318 1980 aa20.25■□□□□ 0.83
CLTCL1-203ENST00000449918 ARVCFO00192 962 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 CDK7P50613 346 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 BEX3Q00994 111 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 SART3Q15020 963 aaKnown RBP20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 DUSP28Q4G0W2 176 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 NCOA7Q8NI08 942 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 WDR11Q9BZH6 1224 aa20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 MRPL11Q9Y3B7 192 aaKnown RBP20.24■□□□□ 0.83
CLTCL1-203ENST00000449918 LAMA3Q16787 3333 aa20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 IFIT3O14879 490 aaKnown RBP20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 QRICH1Q2TAL8 776 aa20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 FBXO11Q86XK2 927 aa20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 SEZ6LQ9BYH1 1024 aa20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 SZT2Q5T011 3432 aa20.23■□□□□ 0.83
CLTCL1-203ENST00000449918 RBM47A0AV96 593 aaKnown RBP20.22■□□□□ 0.83
CLTCL1-203ENST00000449918 KLRF2D3W0D1 207 aa20.22■□□□□ 0.83
CLTCL1-203ENST00000449918 E7EWF7 191 aa20.22■□□□□ 0.83
CLTCL1-203ENST00000449918 TLR3O15455 904 aaKnown RBP20.22■□□□□ 0.83
CLTCL1-203ENST00000449918 SHHQ15465 462 aa20.22■□□□□ 0.83
CLTCL1-203ENST00000449918 CXCL17Q6UXB2 119 aa20.22■□□□□ 0.83
CLTCL1-203ENST00000449918 EDNRBP24530 442 aa20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 ITGB8P26012 769 aa20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 WTAPQ15007 396 aa20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 CENPQQ7L2Z9 268 aaPredicted RBP20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 DEFB123Q8N688 67 aa20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 AMNQ9BXJ7 453 aa20.21■□□□□ 0.83
CLTCL1-203ENST00000449918 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 TIMP1P01033 207 aa20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 FPGSQ05932 587 aa20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 TRAF1Q13077 416 aa20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 BRDTQ58F21 947 aaPredicted RBP20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 NSUN6Q8TEA1 469 aaKnown RBP20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 SCFD2Q8WU76 684 aa20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 MAD2L2Q9UI95 211 aa20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 RBM8AQ9Y5S9 174 aaKnown RBP20.2■□□□□ 0.82
CLTCL1-203ENST00000449918 PTGS1P23219 599 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 CPT1AP50416 773 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 ITGA7Q13683 1181 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 PPP2R5BQ15173 497 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 TMEM67Q5HYA8 995 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 C9orf50Q5SZB4 431 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 CATIPQ7Z7H3 387 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 FAM126BQ8IXS8 530 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 SLC43A3Q8NBI5 491 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 SYTL5Q8TDW5 730 aaPredicted RBP20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 TBC1D5Q92609 795 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 IWS1Q96ST2 819 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 TBX21Q9UL17 535 aa20.19■□□□□ 0.82
CLTCL1-203ENST00000449918 ZBTB5O15062 677 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 TTLL4Q14679 1199 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 GRM4Q14833 912 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 STOX1Q6ZVD7 989 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 OR6J1Q8NGC5 347 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 MTMR8Q96EF0 704 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 RMDN3Q96TC7 470 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 GPHNQ9NQX3 736 aaPredicted RBP20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 POLR3EQ9NVU0 708 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 TAF6LQ9Y6J9 622 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 LTBP2Q14767 1821 aa20.18■□□□□ 0.82
CLTCL1-203ENST00000449918 FAM109BQ6ICB4 259 aaPredicted RBP20.17■□□□□ 0.82
CLTCL1-203ENST00000449918 MFSD5Q6N075 450 aa20.17■□□□□ 0.82
CLTCL1-203ENST00000449918 TAAR1Q96RJ0 339 aa20.17■□□□□ 0.82
CLTCL1-203ENST00000449918 ESYT1Q9BSJ8 1104 aa20.17■□□□□ 0.82
CLTCL1-203ENST00000449918 MAP3K20Q9NYL2 800 aaKnown RBP20.17■□□□□ 0.82
CLTCL1-203ENST00000449918 PCDHA1Q9Y5I3 950 aa20.17■□□□□ 0.82
CLTCL1-203ENST00000449918 KPNA6O60684 536 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 CFBP00751 764 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 CD4P01730 458 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 TXNP10599 105 aaKnown RBP20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 TROAPQ12815 778 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 STXBP2Q15833 593 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 BMP2KLQ5H9B9 411 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 ARHGEF16Q5VV41 709 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 CASC1Q6TDU7 716 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 Q7L0L9 218 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms