RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
CCDC171-203ENST00000449575 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
CCDC171-203ENST00000449575 ZNF236Q9UL36 1845 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 CPLX1O14810 134 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 COBLO75128 1261 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 FDPSP14324 419 aaKnown RBP11.34□□□□□ -0.59
CCDC171-203ENST00000449575 PTPREP23469 700 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 ADORA2AP29274 412 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 MAPK4P31152 587 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 FLT3LGP49771 235 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
CCDC171-203ENST00000449575 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 AMNQ9BXJ7 453 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 ASTN1O14525 1302 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 SLC25A27O95847 323 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 CYP2B6P20813 491 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 KIF22Q14807 665 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 MORN1Q5T089 497 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 NSMFQ6X4W1 530 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 MROH8Q9H579 483 aa11.34□□□□□ -0.59
CCDC171-203ENST00000449575 NOL7Q9UMY1 257 aaKnown RBP11.34□□□□□ -0.59
CCDC171-203ENST00000449575 UQCRHLA0A096LP55 91 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 PRPF3O43395 683 aaKnown RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 UQCRHP07919 91 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 GRB14Q14449 540 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 CCL14Q16627 93 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 USP6NLQ92738 828 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 ACAD9Q9H845 621 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 SEC63Q9UGP8 760 aaKnown RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 HOXA13P31271 388 aaPredicted RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 BAATQ14032 418 aaPredicted RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 FGD4Q96M96 766 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 MMP19Q99542 508 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 RNF26Q9BY78 433 aaPredicted RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 CWC22Q9HCG8 908 aaKnown RBP11.33□□□□□ -0.6
CCDC171-203ENST00000449575 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 COL20A1Q9P218 1284 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 SRRDQ9UH36 339 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 PTCH2Q9Y6C5 1203 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 IVNS1ABPQ9Y6Y0 642 aa11.33□□□□□ -0.6
CCDC171-203ENST00000449575 MYH7BA7E2Y1 1941 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 PTPDC1A2A3K4 754 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 STXBP3O00186 592 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 FCER1AP12319 257 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 SCG2P13521 617 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 ELNP15502 786 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 FOSBP53539 338 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
CCDC171-203ENST00000449575 ANKRD35Q8N283 1001 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 VPS54Q9P1Q0 977 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 KIAA1217Q5T5P2 1943 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 CFBP00751 764 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
CCDC171-203ENST00000449575 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-203ENST00000449575 ZSCAN31Q96LW9 406 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-203ENST00000449575 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 ABCB11O95342 1321 aa11.32□□□□□ -0.6
CCDC171-203ENST00000449575 DNAJC25-GNG10A0A024R161 153 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 CALML3P27482 149 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 DMTNQ08495 405 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 TRIM32Q13049 653 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 MAP2K5Q13163 448 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 KCTD2Q14681 263 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-203ENST00000449575 ORC3Q9UBD5 711 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-203ENST00000449575 SLC15A5A6NIM6 579 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 UBE2SQ16763 222 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 SASS6Q6UVJ0 657 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
CCDC171-203ENST00000449575 CCDC94Q9BW85 323 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-203ENST00000449575 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 BARHL2Q9NY43 387 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
CCDC171-203ENST00000449575 KIAA0100Q14667 2235 aaKnown RBP11.3□□□□□ -0.6
CCDC171-203ENST00000449575 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 MEIS2O14770 477 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 STRNO43815 780 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 NAPAP54920 295 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 DPP9Q86TI2 863 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 FAM133AQ8N9E0 248 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 TRIB2Q92519 343 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms