RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 RAB34Q9BZG1 259 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 CSRNP2Q9H175 543 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 GOLPH3LQ9H4A5 285 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 GBA2Q9HCG7 927 aaPredicted RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 KCNH3Q9ULD8 1083 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 MYPNQ86TC9 1320 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 DICER1Q9UPY3 1922 aaKnown RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 GREB1LQ9C091 1923 aaPredicted RBP10.98□□□□□ -0.65
RFC4-210ENST00000449502 IRF6O14896 467 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 ZNF202O95125 648 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 HOXA13P31271 388 aaPredicted RBP10.98□□□□□ -0.65
RFC4-210ENST00000449502 LONP1P36776 959 aaKnown RBP10.98□□□□□ -0.65
RFC4-210ENST00000449502 PRPHP41219 470 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 OAZ1P54368 228 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 SNAPC2Q13487 334 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 PLS1Q14651 629 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 TKFCQ3LXA3 575 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 SHC4Q6S5L8 630 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 CNNM3Q8NE01 707 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 TSPY26PQ9H489 355 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 NMRK2Q9NPI5 230 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 HOMER2Q9NSB8 354 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 CCDC39Q9UFE4 941 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
RFC4-210ENST00000449502 A0A0G2JLL6 359 aaPredicted RBP10.97□□□□□ -0.65
RFC4-210ENST00000449502 MEIS2O14770 477 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 CCDC192P0DO97 292 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 TAL1P17542 331 aaPredicted RBP10.97□□□□□ -0.65
RFC4-210ENST00000449502 UBA7P41226 1012 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 ARHGAP4P98171 946 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 SPECC1Q5M775 1068 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 LDLRAD1Q5T700 205 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
RFC4-210ENST00000449502 PPP4R3AQ6IN85 833 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 KANK3Q6NY19 840 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 PRRT2Q7Z6L0 340 aaPredicted RBP10.97□□□□□ -0.65
RFC4-210ENST00000449502 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
RFC4-210ENST00000449502 MB21D1Q8N884 522 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 TIGD1Q96MW7 591 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 TEX13BQ9BXU2 312 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 MAP3K20Q9NYL2 800 aaKnown RBP10.97□□□□□ -0.65
RFC4-210ENST00000449502 KCNH4Q9UQ05 1017 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 MRVI1Q9Y6F6 885 aa10.97□□□□□ -0.65
RFC4-210ENST00000449502 SBF1O95248 1867 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 FAM237AA0A1B0GTK4 181 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 WNT7AO00755 349 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 TDP2O95551 362 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 SREBF1P36956 1147 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 STAT3P40763 770 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 TXKP42681 527 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 GTF2A2P52657 109 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 MOXD1Q6UVY6 613 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 NSMFQ6X4W1 530 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 SYMPKQ92797 1274 aaKnown RBP10.96□□□□□ -0.65
RFC4-210ENST00000449502 AK8Q96MA6 479 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 RNF146Q9NTX7 359 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 USP25Q9UHP3 1055 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 AGTPBP1Q9UPW5 1226 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 HPSEQ9Y251 543 aa10.96□□□□□ -0.65
RFC4-210ENST00000449502 ZNF536O15090 1300 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
RFC4-210ENST00000449502 POLR2DO15514 142 aaKnown RBP10.95□□□□□ -0.66
RFC4-210ENST00000449502 CETPP11597 493 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 HOXA7P31268 230 aaPredicted RBP10.95□□□□□ -0.66
RFC4-210ENST00000449502 TECP42680 631 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 GRIN1Q05586 938 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
RFC4-210ENST00000449502 TREML2Q5T2D2 321 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 RNF207Q6ZRF8 634 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 POTEDQ86YR6 584 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 C4orf32Q8N8J7 132 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 IQUBQ8NA54 791 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
RFC4-210ENST00000449502 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
RFC4-210ENST00000449502 DHX58Q96C10 678 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 CDK5RAP3Q96JB5 506 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 PANK2Q9BZ23 570 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 TMEM60Q9H2L4 133 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 ACAD9Q9H845 621 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 FBXO40Q9UH90 709 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 MYH8P13535 1937 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
RFC4-210ENST00000449502 CYP3A7-CYP3A51PA0A087WV96 503 aa10.94□□□□□ -0.66
RFC4-210ENST00000449502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
RFC4-210ENST00000449502 NFIBO00712 420 aa10.94□□□□□ -0.66
RFC4-210ENST00000449502 CYP3A7P24462 503 aa10.94□□□□□ -0.66
RFC4-210ENST00000449502 COPB2P35606 906 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms