RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 PNMA2Q9UL42 364 aa13.52□□□□□ -0.25
CCDC197-203ENST00000449472 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
CCDC197-203ENST00000449472 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
CCDC197-203ENST00000449472 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
CCDC197-203ENST00000449472 IFIT3O14879 490 aaKnown RBP13.51□□□□□ -0.25
CCDC197-203ENST00000449472 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
CCDC197-203ENST00000449472 CDK7P50613 346 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 NKX3-2P78367 333 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 FAAP100Q0VG06 881 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 GLT1D1Q96MS3 346 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 LSG1Q9H089 658 aaKnown RBP13.51□□□□□ -0.25
CCDC197-203ENST00000449472 MAD2L2Q9UI95 211 aa13.51□□□□□ -0.25
CCDC197-203ENST00000449472 LAMA2P24043 3122 aaKnown RBP13.51□□□□□ -0.25
CCDC197-203ENST00000449472 ELP1O95163 1332 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 KLRF2D3W0D1 207 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 CLTBP09497 229 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 ANTXR2P58335 489 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 COL9A3Q14050 684 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-203ENST00000449472 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 LRIT3Q3SXY7 679 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-203ENST00000449472 ANKRD33Q7Z3H0 272 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 TLK2Q86UE8 772 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 AP5M1Q9H0R1 490 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-203ENST00000449472 TMEM39AQ9NV64 488 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 LTBP2Q14767 1821 aa13.5□□□□□ -0.25
CCDC197-203ENST00000449472 ABCB11O95342 1321 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
CCDC197-203ENST00000449472 KIAA0355O15063 1070 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 PPP1R11O60927 126 aaPredicted RBP13.49□□□□□ -0.25
CCDC197-203ENST00000449472 WTAPQ15007 396 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
CCDC197-203ENST00000449472 RALYLQ86SE5 291 aaKnown RBP13.49□□□□□ -0.25
CCDC197-203ENST00000449472 FBXO11Q86XK2 927 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 MB21D2Q8IYB1 491 aaPredicted RBP13.49□□□□□ -0.25
CCDC197-203ENST00000449472 SYTL5Q8TDW5 730 aaPredicted RBP13.49□□□□□ -0.25
CCDC197-203ENST00000449472 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 TOX2Q96NM4 488 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 ESYT1Q9BSJ8 1104 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 COL20A1Q9P218 1284 aa13.49□□□□□ -0.25
CCDC197-203ENST00000449472 LRRC37A2A6NM11 1700 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 GRIN2DO15399 1336 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 ARVCFO00192 962 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 EDNRBP24530 442 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 EPHB4P54760 987 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 PDE4DQ08499 809 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 TROAPQ12815 778 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 GRM4Q14833 912 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
CCDC197-203ENST00000449472 SHHQ15465 462 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 DUSP28Q4G0W2 176 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 C9orf50Q5SZB4 431 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 DNERQ8NFT8 737 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 MTMR8Q96EF0 704 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 MRPL11Q9Y3B7 192 aaKnown RBP13.48□□□□□ -0.25
CCDC197-203ENST00000449472 Q9Y3F1 56 aa13.48□□□□□ -0.25
CCDC197-203ENST00000449472 ERICH2A1L162 156 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 OPLAHO14841 1288 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 SLC27A2O14975 620 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 CYTH3O43739 400 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 RAG1P15918 1043 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 PSMC6P62333 389 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 NECTIN1Q15223 517 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 COPS5Q92905 334 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 PIGSQ96S52 555 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 AMNQ9BXJ7 453 aa13.47□□□□□ -0.25
CCDC197-203ENST00000449472 A0A0U1RQG5 324 aaPredicted RBP13.46□□□□□ -0.25
CCDC197-203ENST00000449472 ZBTB5O15062 677 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 CFBP00751 764 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
CCDC197-203ENST00000449472 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 Q7L0L9 218 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 CATIPQ7Z7H3 387 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 FAM126BQ8IXS8 530 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 RMDN3Q96TC7 470 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 RIOX1Q9H6W3 641 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 ANO2Q9NQ90 1003 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 TBX21Q9UL17 535 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 PCDHA1Q9Y5I3 950 aa13.46□□□□□ -0.25
CCDC197-203ENST00000449472 PRC1O43663 620 aa13.45□□□□□ -0.26
CCDC197-203ENST00000449472 ZEB2O60315 1214 aa13.45□□□□□ -0.26
CCDC197-203ENST00000449472 ARIH2O95376 493 aa13.45□□□□□ -0.26
CCDC197-203ENST00000449472 TIMP1P01033 207 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms