RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RIPK3Q9Y572 518 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 DDX11L8A8MPP1 907 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 GCOM1H8Y6P7 765 aaPredicted RBP22.01■■□□□ 1.11
RPS28-202ENST00000449223 NFIBO00712 420 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 POLR2MP0CAP2 368 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 COPB2P35606 906 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 NFKBIBQ15653 356 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 JAKMIP3Q5VZ66 844 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 LINC00301Q8NCQ3 95 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 CHST13Q8NET6 341 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 LEO1Q8WVC0 666 aaPredicted RBP22.01■■□□□ 1.11
RPS28-202ENST00000449223 CRYGNQ8WXF5 182 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 PARK7Q99497 189 aaKnown RBP22.01■■□□□ 1.11
RPS28-202ENST00000449223 TMEM260Q9NX78 707 aa22.01■■□□□ 1.11
RPS28-202ENST00000449223 TFIP11Q9UBB9 837 aaKnown RBP22.01■■□□□ 1.11
RPS28-202ENST00000449223 GCLCP48506 637 aaPredicted RBP22■■□□□ 1.11
RPS28-202ENST00000449223 ORC2Q13416 577 aaPredicted RBP22■■□□□ 1.11
RPS28-202ENST00000449223 MUM1L1Q5H9M0 696 aa22■■□□□ 1.11
RPS28-202ENST00000449223 FTOQ9C0B1 505 aaKnown RBP eCLIP22■■□□□ 1.11
RPS28-202ENST00000449223 EIF4ENIF1Q9NRA8 985 aaKnown RBP22■■□□□ 1.11
RPS28-202ENST00000449223 RNF146Q9NTX7 359 aa22■■□□□ 1.11
RPS28-202ENST00000449223 SLC25A27O95847 323 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 BMP15O95972 392 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 CFBP00751 764 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 NCLP19338 710 aaKnown RBP21.99■■□□□ 1.11
RPS28-202ENST00000449223 SLC39A14Q15043 492 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 PTPAQ15257 358 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 INF2Q27J81 1249 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 NEK8Q86SG6 692 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 TBCKQ8TEA7 893 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 SPATA32Q96LK8 384 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 ANO3Q9BYT9 981 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 ACAD9Q9H845 621 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 TXNRD2Q9NNW7 524 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 FBXO40Q9UH90 709 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 CLIC4Q9Y696 253 aa21.99■■□□□ 1.11
RPS28-202ENST00000449223 SPDYE3A6NKU9 549 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 FIBPO43427 364 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 CYP2C8P10632 490 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 PTMSP20962 102 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 SREBF2Q12772 1141 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 SF3A1Q15459 793 aaKnown RBP21.98■■□□□ 1.11
RPS28-202ENST00000449223 TTC38Q5R3I4 469 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 KCNG4Q8TDN1 519 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 MORF4L1Q9UBU8 362 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 PCDHB6Q9Y5E3 794 aa21.98■■□□□ 1.11
RPS28-202ENST00000449223 IGF2BP3O00425 579 aaKnown RBP eCLIP21.97■■□□□ 1.11
RPS28-202ENST00000449223 SREBF1P36956 1147 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 TM4SF4P48230 202 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 SHCBP1Q8NEM2 672 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 SMCR8Q8TEV9 937 aaPredicted RBP21.97■■□□□ 1.11
RPS28-202ENST00000449223 TBC1D5Q92609 795 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 GDPD2Q9HCC8 539 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 LMBRD1Q9NUN5 540 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 CEP131Q9UPN4 1083 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 FRMPD4Q14CM0 1322 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 ADGRA2Q96PE1 1338 aa21.97■■□□□ 1.11
RPS28-202ENST00000449223 WNT7AO00755 349 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 EDIL3O43854 480 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 HOXA13P31271 388 aaPredicted RBP21.96■■□□□ 1.11
RPS28-202ENST00000449223 USP11P51784 963 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 ERVK-9P63128 1117 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 ERVK-24P63145 666 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 PPP4R3AQ6IN85 833 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 MOXD1Q6UVY6 613 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 IFNL1Q8IU54 200 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 MOV10L1Q9BXT6 1211 aaKnown RBP21.96■■□□□ 1.11
RPS28-202ENST00000449223 HOMER2Q9NSB8 354 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 LCTP09848 1927 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 RPTORQ8N122 1335 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 PPP6R2O75170 966 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 RPS6P62753 249 aaKnown RBP21.96■■□□□ 1.11
RPS28-202ENST00000449223 NOGQ13253 232 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 NBR1Q14596 966 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 PLS1Q14651 629 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 NAP1L4Q99733 375 aaKnown RBP21.96■■□□□ 1.11
RPS28-202ENST00000449223 PAGR1Q9BTK6 254 aa21.96■■□□□ 1.11
RPS28-202ENST00000449223 SPTLC2O15270 562 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 CYP3A4P08684 503 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 CEBPZQ03701 1054 aaKnown RBP21.95■■□□□ 1.1
RPS28-202ENST00000449223 STK38Q15208 465 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 DEFB115Q30KQ5 88 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 RNF207Q6ZRF8 634 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 REM2Q8IYK8 340 aaPredicted RBP21.95■■□□□ 1.1
RPS28-202ENST00000449223 SYTL5Q8TDW5 730 aaPredicted RBP21.95■■□□□ 1.1
RPS28-202ENST00000449223 PGBD1Q96JS3 809 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 EHMT1Q9H9B1 1298 aa21.95■■□□□ 1.1
RPS28-202ENST00000449223 PFASO15067 1338 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 CYP3A7-CYP3A51PA0A087WV96 503 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 GCFC2P16383 781 aaKnown RBP21.94■■□□□ 1.1
RPS28-202ENST00000449223 CYP3A7P24462 503 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 FAM110CQ1W6H9 321 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 Q3C1V9 767 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 CYP4F22Q6NT55 531 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 GPRC5AQ8NFJ5 357 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 MBOAT7Q96N66 472 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 MROH8Q9H579 483 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 A1CFQ9NQ94 594 aaKnown RBP21.94■■□□□ 1.1
RPS28-202ENST00000449223 CYP39A1Q9NYL5 469 aa21.94■■□□□ 1.1
RPS28-202ENST00000449223 COL20A1Q9P218 1284 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms