RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 FLRT1Q9NZU1 646 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 SEC63Q9UGP8 760 aaKnown RBP10.63□□□□□ -0.71
RFX3-207ENST00000449190 FBXO40Q9UH90 709 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 RLFQ13129 1914 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 PFKFB2O60825 505 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
RFX3-207ENST00000449190 NUBP1P53384 320 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 ZNF792Q3KQV3 632 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 RASGRP2Q7LDG7 609 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 UBE2Q1Q7Z7E8 422 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 CCDC82Q8N4S0 544 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 ANKLE1Q8NAG6 615 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 DDX11Q96FC9 970 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 OGDHLQ9ULD0 1010 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 TPCN1Q9ULQ1 816 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
RFX3-207ENST00000449190 MSCO60682 206 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 PLEKHA8P1O95397 391 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 CCND3P30281 292 aaPredicted RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 CYP2C19P33261 490 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 SNAP25P60880 206 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 SSRP1Q08945 709 aaKnown RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 SRBD1Q8N5C6 995 aaKnown RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 MSL3Q8N5Y2 521 aaKnown RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 PIBF1Q8WXW3 757 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 MAML3Q96JK9 1138 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 CPVLQ9H3G5 476 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 OCEL1Q9H607 264 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 RIOX1Q9H6W3 641 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 JMJD4Q9H9V9 463 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 NCOA5Q9HCD5 579 aaKnown RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
RFX3-207ENST00000449190 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 CCPG1Q9ULG6 757 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
RFX3-207ENST00000449190 ZNF536O15090 1300 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 DNAJC25-GNG10A0A024R161 153 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 PNMA6FA0A0J9YX94 578 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 ZBTB5O15062 677 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 FARP2O94887 1054 aaPredicted RBP10.6□□□□□ -0.71
RFX3-207ENST00000449190 ICAM1P05362 532 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 PGK2P07205 417 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 CDC27P30260 824 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 CDC37Q16543 378 aaPredicted RBP10.6□□□□□ -0.71
RFX3-207ENST00000449190 ME3Q16798 604 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 HSCBQ8IWL3 235 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 CMTR1Q8N1G2 835 aaKnown RBP10.6□□□□□ -0.71
RFX3-207ENST00000449190 NECAB1Q8N987 351 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 AGBL1Q96MI9 1066 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 PIGSQ96S52 555 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 HTATIP2Q9BUP3 242 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 AMNQ9BXJ7 453 aa10.6□□□□□ -0.71
RFX3-207ENST00000449190 V9GY48 417 aaPredicted RBP10.6□□□□□ -0.71
RFX3-207ENST00000449190 PRPF3O43395 683 aaKnown RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 ALAS1P13196 640 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 CYBAP13498 195 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 IFNAR1P17181 557 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 CNGA1P29973 690 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 SCRN1Q12765 414 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 QRICH1Q2TAL8 776 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 PRPF38BQ5VTL8 546 aaKnown RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 MAMDC4Q6UXC1 1216 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 NECAB2Q7Z6G3 386 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 ANKRD35Q8N283 1001 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 TRPV1Q8NER1 839 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 WASF1Q92558 559 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 GTF3C6Q969F1 213 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 TINF2Q9BSI4 451 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 SLC26A6Q9BXS9 759 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 ACAD9Q9H845 621 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 DDX20Q9UHI6 824 aaKnown RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
RFX3-207ENST00000449190 NID2Q14112 1375 aa10.59□□□□□ -0.71
RFX3-207ENST00000449190 ABCB11O95342 1321 aa10.58□□□□□ -0.71
RFX3-207ENST00000449190 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
RFX3-207ENST00000449190 SEPT4O43236 478 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 CYTH3O43739 400 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 USH1GQ495M9 461 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 PRAMEF19Q5SWL8 479 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 MCF2L2Q86YR7 1114 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 CCDC83Q8IWF9 413 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 DPF3Q92784 378 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 PHKBQ93100 1093 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 SNX21Q969T3 373 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 MTMR8Q96EF0 704 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 TMX3Q96JJ7 454 aa10.58□□□□□ -0.72
RFX3-207ENST00000449190 LLPHQ9BRT6 129 aaKnown RBP10.58□□□□□ -0.72
RFX3-207ENST00000449190 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms