RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 IFNAR1P17181 557 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 TRIM32Q13049 653 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 BAATQ14032 418 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-211ENST00000449159 WWC2Q6AWC2 1192 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 GTF3C6Q969F1 213 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 SHISA4Q96DD7 197 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 DDX11Q96FC9 970 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 FGD4Q96M96 766 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 SLC26A6Q9BXS9 759 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 PNMA2Q9UL42 364 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 LIMCH1Q9UPQ0 1083 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
SMPD4-211ENST00000449159 LAMA3Q16787 3333 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 PTPDC1A2A3K4 754 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 CPLX1O14810 134 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 CTDNEP1O95476 244 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 GRK4P32298 578 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 RPS6P62753 249 aaKnown RBP12.28□□□□□ -0.44
SMPD4-211ENST00000449159 PKN1Q16512 942 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 ZNF792Q3KQV3 632 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 FAM133AQ8N9E0 248 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 MAML3Q96JK9 1138 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
SMPD4-211ENST00000449159 PFASO15067 1338 aa12.28□□□□□ -0.44
SMPD4-211ENST00000449159 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 PRPF3O43395 683 aaKnown RBP12.27□□□□□ -0.45
SMPD4-211ENST00000449159 ST18O60284 1047 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 CFBP00751 764 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 IGHA2P01877 340 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 INHAP05111 366 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 CALML3P27482 149 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-211ENST00000449159 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-211ENST00000449159 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 RNF26Q9BY78 433 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-211ENST00000449159 COL20A1Q9P218 1284 aa12.27□□□□□ -0.45
SMPD4-211ENST00000449159 STXBP3O00186 592 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 JAK2O60674 1132 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 HMGCRP04035 888 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 SCG2P13521 617 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 CYP2C19P33261 490 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 NAPAP54920 295 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 SSRP1Q08945 709 aaKnown RBP12.26□□□□□ -0.45
SMPD4-211ENST00000449159 CCDC83Q8IWF9 413 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 RGS22Q8NE09 1264 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
SMPD4-211ENST00000449159 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 SLC5A4Q9NY91 659 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-211ENST00000449159 COL6A3P12111 3177 aa12.26□□□□□ -0.45
SMPD4-211ENST00000449159 KIAA1217Q5T5P2 1943 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 ADAMTS3O15072 1205 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
SMPD4-211ENST00000449159 HSD17B4P51659 736 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
SMPD4-211ENST00000449159 GHRHRQ02643 423 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 TRAF1Q13077 416 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 MTFR1Q15390 333 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 OLFML2BQ68BL8 750 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 CPLX2Q6PUV4 134 aaKnown RBP12.25□□□□□ -0.45
SMPD4-211ENST00000449159 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 MCF2L2Q86YR7 1114 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 TRIM22Q8IYM9 498 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 TRPV1Q8NER1 839 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 SYTL5Q8TDW5 730 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-211ENST00000449159 ZSCAN31Q96LW9 406 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-211ENST00000449159 TAAR1Q96RJ0 339 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 TINF2Q9BSI4 451 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 BARHL2Q9NY43 387 aa12.25□□□□□ -0.45
SMPD4-211ENST00000449159 DIS3Q9Y2L1 958 aaKnown RBP12.25□□□□□ -0.45
SMPD4-211ENST00000449159 MYH7BA7E2Y1 1941 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 GCOM1H8Y6P7 765 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 MEIS2O14770 477 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 CDKL5O76039 1030 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 POLR2MP0CAP2 368 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 CCL5P13501 91 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 FDPSP14324 419 aaKnown RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 GJA8P48165 433 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 UBXN2AP68543 259 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 CACNB2Q08289 660 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 UBE2SQ16763 222 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 PRAMEF19Q5SWL8 479 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 USP17L6PQ6QN14 398 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 TMX3Q96JJ7 454 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 HTATIP2Q9BUP3 242 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 SH2B1Q9NRF2 756 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 STK36Q9NRP7 1315 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 VPS54Q9P1Q0 977 aa12.24□□□□□ -0.45
SMPD4-211ENST00000449159 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
SMPD4-211ENST00000449159 DNAH12Q6ZR08 3092 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms