RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ACAD9Q9H845 621 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
SHMT2-203ENST00000449049 HSPA6P17066 643 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 UBE2SQ16763 222 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 USP17L6PQ6QN14 398 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-203ENST00000449049 FBXO40Q9UH90 709 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-203ENST00000449049 TLR2O60603 784 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 CFBP00751 764 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 BCRP11274 1271 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
SHMT2-203ENST00000449049 MCTP2Q6DN12 878 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 KRT25Q7Z3Z0 450 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 TNPO1Q92973 898 aaKnown RBP16.09■□□□□ 0.17
SHMT2-203ENST00000449049 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
SHMT2-203ENST00000449049 CA12O43570 354 aa16.08■□□□□ 0.16
SHMT2-203ENST00000449049 ERCC3P19447 782 aa16.08■□□□□ 0.16
SHMT2-203ENST00000449049 CCNA1P78396 465 aa16.08■□□□□ 0.16
SHMT2-203ENST00000449049 AP3B2Q13367 1082 aa16.08■□□□□ 0.16
SHMT2-203ENST00000449049 NOM1Q5C9Z4 860 aaKnown RBP16.08■□□□□ 0.16
SHMT2-203ENST00000449049 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
SHMT2-203ENST00000449049 MROH8Q9H579 483 aa16.08■□□□□ 0.16
SHMT2-203ENST00000449049 CRHR2Q13324 411 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 MYSM1Q5VVJ2 828 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 C17orf99Q6UX52 265 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 NCAPG2Q86XI2 1143 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 CCDC194A0A1B0GVG4 234 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 FAM205CA6NFA0 338 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 FOSP01100 380 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-203ENST00000449049 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-203ENST00000449049 FAM173BQ6P4H8 233 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 CPA4Q9UI42 421 aa16.07■□□□□ 0.16
SHMT2-203ENST00000449049 RPS6P62753 249 aaKnown RBP16.06■□□□□ 0.16
SHMT2-203ENST00000449049 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHMT2-203ENST00000449049 SLC30A10Q6XR72 485 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 ANO3Q9BYT9 981 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 PORCNQ9H237 461 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 R3HDMLQ9H3Y0 253 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
SHMT2-203ENST00000449049 RILPL1Q5EBL4 403 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-203ENST00000449049 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 CYP39A1Q9NYL5 469 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
SHMT2-203ENST00000449049 LCTP09848 1927 aa16.05■□□□□ 0.16
SHMT2-203ENST00000449049 PFASO15067 1338 aa16.05■□□□□ 0.16
SHMT2-203ENST00000449049 SPDYE3A6NKU9 549 aa16.05■□□□□ 0.16
SHMT2-203ENST00000449049 BAATQ14032 418 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-203ENST00000449049 CLEC17AQ6ZS10 378 aa16.05■□□□□ 0.16
SHMT2-203ENST00000449049 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
SHMT2-203ENST00000449049 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 TRAPPC10P48553 1259 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-203ENST00000449049 ATL3Q6DD88 541 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 TBCKQ8TEA7 893 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
SHMT2-203ENST00000449049 PLXNB2O15031 1838 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 DNM1Q05193 864 aaKnown RBP16.04■□□□□ 0.16
SHMT2-203ENST00000449049 INF2Q27J81 1249 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 FOXD4L6Q3SYB3 417 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-203ENST00000449049 FOXD4L3Q6VB84 417 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-203ENST00000449049 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 CRYGNQ8WXF5 182 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 ZNF236Q9UL36 1845 aa16.04■□□□□ 0.16
SHMT2-203ENST00000449049 MAPK4P31152 587 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 SREBF1P36956 1147 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 ZNF396Q96N95 335 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-203ENST00000449049 NBR1Q14596 966 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 NEK8Q86SG6 692 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 ABRAQ8N0Z2 381 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 MMP19Q99542 508 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 EHMT1Q9H9B1 1298 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 RNF186Q9NXI6 227 aa16.03■□□□□ 0.16
SHMT2-203ENST00000449049 WNT7AO00755 349 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 EDIL3O43854 480 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
SHMT2-203ENST00000449049 FCER1AP12319 257 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 KRT85P78386 507 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 KCTD2Q14681 263 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 TAAR1Q96RJ0 339 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 USP28Q96RU2 1077 aa16.02■□□□□ 0.16
SHMT2-203ENST00000449049 MYH7BA7E2Y1 1941 aa16.02■□□□□ 0.15
SHMT2-203ENST00000449049 DNAJC25-GNG10A0A024R161 153 aa16.01■□□□□ 0.15
SHMT2-203ENST00000449049 STRNO43815 780 aa16.01■□□□□ 0.15
SHMT2-203ENST00000449049 USP11P51784 963 aa16.01■□□□□ 0.15
SHMT2-203ENST00000449049 TTC38Q5R3I4 469 aa16.01■□□□□ 0.15
SHMT2-203ENST00000449049 WDR78Q5VTH9 848 aa16.01■□□□□ 0.15
SHMT2-203ENST00000449049 GPR142Q7Z601 462 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms