RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ANKRD33Q7Z3H0 272 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 TRIM43Q96BQ3 446 aaPredicted RBP22.99■■□□□ 1.27
VCP-203ENST00000448530 TOX2Q96NM4 488 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 VAT1LQ9HCJ6 419 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 PDGFCQ9NRA1 345 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 GNEQ9Y223 722 aaKnown RBP22.99■■□□□ 1.27
VCP-203ENST00000448530 ABCB11O95342 1321 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 A0A0U1RQG5 324 aaPredicted RBP22.98■■□□□ 1.27
VCP-203ENST00000448530 SMPD1P17405 629 aa22.98■■□□□ 1.27
VCP-203ENST00000448530 NKX3-2P78367 333 aa22.98■■□□□ 1.27
VCP-203ENST00000448530 BEX3Q00994 111 aa22.98■■□□□ 1.27
VCP-203ENST00000448530 PDE4DQ08499 809 aa22.98■■□□□ 1.27
VCP-203ENST00000448530 SART3Q15020 963 aaKnown RBP22.98■■□□□ 1.27
VCP-203ENST00000448530 FSCN1Q16658 493 aaKnown RBP22.98■■□□□ 1.27
VCP-203ENST00000448530 GPR153Q6NV75 609 aa22.98■■□□□ 1.27
VCP-203ENST00000448530 Q9Y3F1 56 aa22.98■■□□□ 1.27
VCP-203ENST00000448530 IFIT3O14879 490 aaKnown RBP22.97■■□□□ 1.27
VCP-203ENST00000448530 KIAA0355O15063 1070 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 CABYRO75952 493 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 SEC23AQ15436 765 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 FBXO11Q86XK2 927 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 RGS22Q8NE09 1264 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 DNERQ8NFT8 737 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 NCOA7Q8NI08 942 aa22.97■■□□□ 1.27
VCP-203ENST00000448530 SZT2Q5T011 3432 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 CTAGE5O15320 804 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 FAAP100Q0VG06 881 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 QRICH1Q2TAL8 776 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 MCF2L2Q86YR7 1114 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 WDR11Q9BZH6 1224 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 MAF1Q9H063 256 aa22.96■■□□□ 1.27
VCP-203ENST00000448530 KLRF2D3W0D1 207 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 E7EWF7 191 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 ARVCFO00192 962 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 TLR3O15455 904 aaKnown RBP22.95■■□□□ 1.26
VCP-203ENST00000448530 DUSP28Q4G0W2 176 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 CXCL17Q6UXB2 119 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 JMJD4Q9H9V9 463 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 MRPL11Q9Y3B7 192 aaKnown RBP22.95■■□□□ 1.26
VCP-203ENST00000448530 LAMA3Q16787 3333 aa22.95■■□□□ 1.26
VCP-203ENST00000448530 CDK7P50613 346 aa22.94■■□□□ 1.26
VCP-203ENST00000448530 WTAPQ15007 396 aa22.94■■□□□ 1.26
VCP-203ENST00000448530 MAP4K1Q92918 833 aa22.94■■□□□ 1.26
VCP-203ENST00000448530 RBM8AQ9Y5S9 174 aaKnown RBP22.94■■□□□ 1.26
VCP-203ENST00000448530 SHHQ15465 462 aa22.93■■□□□ 1.26
VCP-203ENST00000448530 CENPQQ7L2Z9 268 aaPredicted RBP22.93■■□□□ 1.26
VCP-203ENST00000448530 STAG2Q8N3U4 1231 aa22.93■■□□□ 1.26
VCP-203ENST00000448530 DEFB123Q8N688 67 aa22.93■■□□□ 1.26
VCP-203ENST00000448530 AMNQ9BXJ7 453 aa22.93■■□□□ 1.26
VCP-203ENST00000448530 PTGS1P23219 599 aa22.92■■□□□ 1.26
VCP-203ENST00000448530 FPGSQ05932 587 aa22.92■■□□□ 1.26
VCP-203ENST00000448530 PPP2R5BQ15173 497 aa22.92■■□□□ 1.26
VCP-203ENST00000448530 BRDTQ58F21 947 aaPredicted RBP22.92■■□□□ 1.26
VCP-203ENST00000448530 SCFD2Q8WU76 684 aa22.92■■□□□ 1.26
VCP-203ENST00000448530 SEZ6LQ9BYH1 1024 aa22.92■■□□□ 1.26
VCP-203ENST00000448530 RBM47A0AV96 593 aaKnown RBP22.91■■□□□ 1.26
VCP-203ENST00000448530 NKRFO15226 690 aaKnown RBP eCLIP22.91■■□□□ 1.26
VCP-203ENST00000448530 TIMP1P01033 207 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 EDNRBP24530 442 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 ITGB8P26012 769 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 CPT1AP50416 773 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 TRAF1Q13077 416 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 ITGA7Q13683 1181 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 TMEM67Q5HYA8 995 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 C9orf50Q5SZB4 431 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 TMEM63BQ5T3F8 832 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 OR6J1Q8NGC5 347 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 NSUN6Q8TEA1 469 aaKnown RBP22.91■■□□□ 1.26
VCP-203ENST00000448530 MAD2L2Q9UI95 211 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 TAF6LQ9Y6J9 622 aa22.91■■□□□ 1.26
VCP-203ENST00000448530 PALM3A6NDB9 673 aaPredicted RBP22.9■■□□□ 1.26
VCP-203ENST00000448530 GRM4Q14833 912 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 CHST3Q7LGC8 479 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 CATIPQ7Z7H3 387 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 FAM126BQ8IXS8 530 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 SYTL5Q8TDW5 730 aaPredicted RBP22.9■■□□□ 1.26
VCP-203ENST00000448530 TBC1D5Q92609 795 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 GPHNQ9NQX3 736 aaPredicted RBP22.9■■□□□ 1.26
VCP-203ENST00000448530 POLR3EQ9NVU0 708 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 TBX21Q9UL17 535 aa22.9■■□□□ 1.26
VCP-203ENST00000448530 ZBTB5O15062 677 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 CFBP00751 764 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 TXNP10599 105 aaKnown RBP22.89■■□□□ 1.25
VCP-203ENST00000448530 TTLL4Q14679 1199 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 STOX1Q6ZVD7 989 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 HOMER1Q86YM7 354 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 TAAR1Q96RJ0 339 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 RMDN3Q96TC7 470 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 ESYT1Q9BSJ8 1104 aa22.89■■□□□ 1.25
VCP-203ENST00000448530 ARHGEF16Q5VV41 709 aa22.88■■□□□ 1.25
VCP-203ENST00000448530 Q7L0L9 218 aa22.88■■□□□ 1.25
VCP-203ENST00000448530 SLC43A3Q8NBI5 491 aa22.88■■□□□ 1.25
VCP-203ENST00000448530 RNPC3Q96LT9 517 aaKnown RBP22.88■■□□□ 1.25
VCP-203ENST00000448530 IWS1Q96ST2 819 aa22.88■■□□□ 1.25
VCP-203ENST00000448530 PCDHA1Q9Y5I3 950 aa22.88■■□□□ 1.25
VCP-203ENST00000448530 MYL3P08590 195 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 PPIGQ13427 754 aaKnown RBP eCLIP22.87■■□□□ 1.254e-9■□□□□ 10.8
VCP-203ENST00000448530 STXBP2Q15833 593 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 BMP2KLQ5H9B9 411 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms