RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 WHAMMP3Q1A5X7 153 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 CABP7Q86V35 215 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 FAM76AQ8TAV0 307 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 BMP3P12645 472 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 SV2BQ7L1I2 683 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 BICD1Q96G01 975 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 ZNF341Q9BYN7 854 aa12.54□□□□□ -0.4
PTCH2-203ENST00000447098 FAM170AA1A519 330 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 ZBED4O75132 1171 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 TRIM21P19474 475 aaKnown RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 CASP14P31944 242 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 ARID5AQ03989 594 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 DCAF15Q66K64 600 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 IQCEQ6IPM2 695 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 ACRBPQ8NEB7 543 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 TBCKQ8TEA7 893 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 VPS16Q9H269 839 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 CCPG1Q9ULG6 757 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 SYNRGQ9UMZ2 1314 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 E2F4Q16254 413 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 GRIK5Q16478 980 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 ROBO1Q9Y6N7 1651 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 PSMD14O00487 310 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
PTCH2-203ENST00000447098 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 MYO6Q9UM54 1294 aa12.53□□□□□ -0.4
PTCH2-203ENST00000447098 FAM13AO94988 1023 aa12.52□□□□□ -0.4
PTCH2-203ENST00000447098 VSNL1P62760 191 aa12.52□□□□□ -0.4
PTCH2-203ENST00000447098 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.4
PTCH2-203ENST00000447098 RESP18Q5W5W9 173 aa12.52□□□□□ -0.4
PTCH2-203ENST00000447098 TMTC1Q8IUR5 882 aa12.52□□□□□ -0.4
PTCH2-203ENST00000447098 NELFCDQ8IXH7 590 aa12.52□□□□□ -0.4
PTCH2-203ENST00000447098 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.4
PTCH2-203ENST00000447098 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 LIG3P49916 1009 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 AMNQ9BXJ7 453 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 ERLIN2O94905 339 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 ASPRV1Q53RT3 343 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 BEND6Q5SZJ8 279 aaPredicted RBP12.52□□□□□ -0.41
PTCH2-203ENST00000447098 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 TTBK2Q6IQ55 1244 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 EPSTI1Q96J88 318 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 PCDHA12Q9UN75 941 aa12.52□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 CYP26C1Q6V0L0 522 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 CCDC91Q7Z6B0 441 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 FOXP4Q8IVH2 680 aaPredicted RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 PANX2Q96RD6 677 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 PNKPQ96T60 521 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 GINS2Q9Y248 185 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 GOLGA6CA6NDK9 693 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 PRPF3O43395 683 aaKnown RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 GOLGA6DP0CG33 693 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 KRT9P35527 623 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 CKAP4Q07065 602 aaKnown RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 STRIP1Q5VSL9 837 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 GOLGA6AQ9NYA3 693 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 TEX33O43247 280 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 HARSP12081 509 aaKnown RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 CCDC122Q5T0U0 273 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
PTCH2-203ENST00000447098 SRBD1Q8N5C6 995 aaKnown RBP12.51□□□□□ -0.41
PTCH2-203ENST00000447098 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms