RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 KIAA1211Q6ZU35 1233 aa21.34■■□□□ 1.01
COL9A1-205ENST00000447041 ZSCAN10Q96SZ4 725 aaPredicted RBP21.34■■□□□ 1.01
COL9A1-205ENST00000447041 KAT14Q9H8E8 782 aa21.34■■□□□ 1.01
COL9A1-205ENST00000447041 TNKSO95271 1327 aa21.33■■□□□ 1.01
COL9A1-205ENST00000447041 NT5C2P49902 561 aa21.33■■□□□ 1.01
COL9A1-205ENST00000447041 RPS6P62753 249 aaKnown RBP21.33■■□□□ 1.01
COL9A1-205ENST00000447041 IRX6P78412 446 aaPredicted RBP21.33■■□□□ 1.01
COL9A1-205ENST00000447041 USH1GQ495M9 461 aa21.33■■□□□ 1.01
COL9A1-205ENST00000447041 TTC22Q5TAA0 569 aa21.33■■□□□ 1.01
COL9A1-205ENST00000447041 ENAHQ8N8S7 591 aaPredicted RBP21.33■■□□□ 1.01
COL9A1-205ENST00000447041 ZSWIM5Q9P217 1185 aa21.33■■□□□ 1.01
COL9A1-205ENST00000447041 SMAD3P84022 425 aaKnown RBP21.32■■□□□ 1
COL9A1-205ENST00000447041 CDC37Q16543 378 aaPredicted RBP21.32■■□□□ 1
COL9A1-205ENST00000447041 CCDC178Q5BJE1 867 aa21.32■■□□□ 1
COL9A1-205ENST00000447041 ANKS1AQ92625 1134 aa21.32■■□□□ 1
COL9A1-205ENST00000447041 PPP1R12CQ9BZL4 782 aa21.32■■□□□ 1
COL9A1-205ENST00000447041 PNMA2Q9UL42 364 aa21.32■■□□□ 1
COL9A1-205ENST00000447041 Q9Y3F1 56 aa21.32■■□□□ 1
COL9A1-205ENST00000447041 GRIN2DO15399 1336 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 LOC102724159A0A0B4J2E5 919 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 TLR3O15455 904 aaKnown RBP21.31■■□□□ 1
COL9A1-205ENST00000447041 CABYRO75952 493 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 CD4P01730 458 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 PSMC6P62333 389 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 PWP2Q15269 919 aaKnown RBP21.31■■□□□ 1
COL9A1-205ENST00000447041 DUSP28Q4G0W2 176 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 MFSD5Q6N075 450 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 SLC43A3Q8NBI5 491 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 CTNNA3Q9UI47 895 aa21.31■■□□□ 1
COL9A1-205ENST00000447041 ZEB2O60315 1214 aa21.3■■□□□ 1
COL9A1-205ENST00000447041 ITGA7Q13683 1181 aa21.3■■□□□ 1
COL9A1-205ENST00000447041 ADGRF4Q8IZF3 695 aa21.3■■□□□ 1
COL9A1-205ENST00000447041 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.3■■□□□ 1
COL9A1-205ENST00000447041 WDR11Q9BZH6 1224 aa21.3■■□□□ 1
COL9A1-205ENST00000447041 KRT23Q9C075 422 aa21.3■■□□□ 1
COL9A1-205ENST00000447041 RBM47A0AV96 593 aaKnown RBP21.29■■□□□ 1
COL9A1-205ENST00000447041 CSF2RAP15509 400 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 EDNRBP24530 442 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 PDE4DQ08499 809 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 ASPRV1Q53RT3 343 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 TTYH1Q9H313 450 aaPredicted RBP21.29■■□□□ 1
COL9A1-205ENST00000447041 CNNM2Q9H8M5 875 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 MYH6P13533 1939 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 EYSQ5T1H1 3165 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 RAD50Q92878 1312 aa21.29■■□□□ 1
COL9A1-205ENST00000447041 CYP2C18P33260 490 aa21.28■■□□□ 1
COL9A1-205ENST00000447041 PPIGQ13427 754 aaKnown RBP eCLIP21.28■■□□□ 1
COL9A1-205ENST00000447041 C16orf59Q7L2K0 433 aa21.28■■□□□ 1
COL9A1-205ENST00000447041 DNERQ8NFT8 737 aa21.28■■□□□ 1
COL9A1-205ENST00000447041 UBAC1Q9BSL1 405 aa21.28■■□□□ 1
COL9A1-205ENST00000447041 SEMA6BQ9H3T3 888 aa21.28■■□□□ 1
COL9A1-205ENST00000447041 UMODL1Q5DID0 1318 aa21.28■■□□□ 1
COL9A1-205ENST00000447041 B4GALT4O60513 344 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 PARP1P09874 1014 aaKnown RBP21.27■■□□□ 1
COL9A1-205ENST00000447041 ACRP10323 421 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 QRICH1Q2TAL8 776 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 CYB5R4Q7L1T6 521 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 TMEM199Q8N511 208 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 OR6J1Q8NGC5 347 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 TBC1D5Q92609 795 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 CDX2Q99626 313 aaPredicted RBP21.27■■□□□ 1
COL9A1-205ENST00000447041 TRPV6Q9H1D0 765 aa21.27■■□□□ 1
COL9A1-205ENST00000447041 ABCB11O95342 1321 aa21.27■□□□□ 0.99
COL9A1-205ENST00000447041 DHX16O60231 1041 aaKnown RBP21.26■□□□□ 0.99
COL9A1-205ENST00000447041 PPP2R5BQ15173 497 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 SEC23AQ15436 765 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 TMEM240Q5SV17 173 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 IFIT1BQ5T764 474 aaKnown RBP21.26■□□□□ 0.99
COL9A1-205ENST00000447041 STAG2Q8N3U4 1231 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 RGS22Q8NE09 1264 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 COPS5Q92905 334 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 MPHOSPH6Q99547 160 aaKnown RBP21.26■□□□□ 0.99
COL9A1-205ENST00000447041 HIPK3Q9H422 1215 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 JMJD4Q9H9V9 463 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 COL20A1Q9P218 1284 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 UNC80Q8N2C7 3258 aa21.26■□□□□ 0.99
COL9A1-205ENST00000447041 CHMLP26374 656 aa21.25■□□□□ 0.99
COL9A1-205ENST00000447041 CPT1AP50416 773 aa21.25■□□□□ 0.99
COL9A1-205ENST00000447041 PURAQ00577 322 aaKnown RBP21.25■□□□□ 0.99
COL9A1-205ENST00000447041 PTH1RQ03431 593 aa21.25■□□□□ 0.99
COL9A1-205ENST00000447041 VAT1LQ9HCJ6 419 aa21.25■□□□□ 0.99
COL9A1-205ENST00000447041 ARIH2O95376 493 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 MYL3P08590 195 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 CYP21A2P08686 494 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 ZNF365Q70YC5 407 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 FBXO11Q86XK2 927 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 SYTL5Q8TDW5 730 aaPredicted RBP21.24■□□□□ 0.99
COL9A1-205ENST00000447041 SCFD2Q8WU76 684 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 TAAR1Q96RJ0 339 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 SEZ6LQ9BYH1 1024 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 POLR3EQ9NVU0 708 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 TAF6LQ9Y6J9 622 aa21.24■□□□□ 0.99
COL9A1-205ENST00000447041 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.23■□□□□ 0.99
COL9A1-205ENST00000447041 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.23■□□□□ 0.99
COL9A1-205ENST00000447041 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL9A1-205ENST00000447041 DNAJB2P25686 324 aa21.23■□□□□ 0.99
COL9A1-205ENST00000447041 CCL23P55773 120 aa21.23■□□□□ 0.99
COL9A1-205ENST00000447041 PSRC1Q6PGN9 363 aaPredicted RBP21.23■□□□□ 0.99
COL9A1-205ENST00000447041 RUFY2Q8WXA3 655 aa21.23■□□□□ 0.99
COL9A1-205ENST00000447041 MYLIPQ8WY64 445 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms