RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TMEM266Q2M3C6 531 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 SYDE2Q5VT97 1194 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 CALML4Q96GE6 196 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 MTMR9Q96QG7 549 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 AMNQ9BXJ7 453 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 SPTLC3Q9NUV7 552 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 RMND1Q9NWS8 449 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 UTRNP46939 3433 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 SPATA1Q5VX52 437 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 GDAQ9Y2T3 454 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 POTEMA6NI47 508 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 SFPQP23246 707 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 TNIP1Q15025 636 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 KIAA1755Q5JYT7 1200 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 ZNF658Q5TYW1 1059 aaPredicted RBP10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 ARMCX5Q6P1M9 558 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 CCDC84Q86UT8 332 aaPredicted RBP10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 LRRC15Q8TF66 581 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 CDK5RAP3Q96JB5 506 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 ZBTB21Q9ULJ3 1066 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 GJA3Q9Y6H8 435 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 SIPA1L1O43166 1804 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 ZNF18P17022 549 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 STAT2P52630 851 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 CT47A1Q5JQC4 288 aaPredicted RBP10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 MMTAG2Q9BU76 263 aaKnown RBP10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 RAB34Q9BZG1 259 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 KBTBD4Q9NVX7 518 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
COL6A4P1-201ENST00000446690 ZNF646O15015 1829 aaPredicted RBP10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 NFKBIEO00221 500 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 EGFRP00533 1210 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 PRCPP42785 496 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 CCZ1BP86790 482 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 GOLGA8FQ08AF8 430 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 GOLGA8DPQ0D2H9 430 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 CCDC174Q6PII3 467 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 VSTM4Q8IW00 320 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 MTMR14Q8NCE2 650 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 NELFBQ8WX92 580 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 GLT8D2Q9H1C3 349 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 INTS13Q9NVM9 706 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 TRMT1Q9NXH9 659 aaKnown RBP10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 PCDHA12Q9UN75 941 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 TMX2Q9Y320 296 aa10.71□□□□□ -0.69
COL6A4P1-201ENST00000446690 MEIS2O14770 477 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 HOXA13P31271 388 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 TERF1P54274 439 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 RASSF7Q02833 373 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 PAK1Q13153 545 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 RASA3Q14644 834 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 KRT79Q5XKE5 535 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 FAM83AQ86UY5 434 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 CCDC150Q8NCX0 1101 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 SNX29Q8TEQ0 813 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 C16orf45Q96MC5 204 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 ANO3Q9BYT9 981 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 CUEDC2Q9H467 287 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 MYH4Q9Y623 1939 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 SPDYE3A6NKU9 549 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 CAP2P40123 477 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 ASIC1P78348 528 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 AMPD3Q01432 767 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 HAS1Q92839 578 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 NUDT12Q9BQG2 462 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 GLIS2Q9BZE0 524 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 RWDD2AQ9UIY3 292 aa10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 COL2A1P02458 1487 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P1-201ENST00000446690 NRDCO43847 1150 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 TBC1D12O60347 775 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 MYL1P05976 194 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 GCFC2P16383 781 aaKnown RBP10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 PDE4DQ08499 809 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 GRB10Q13322 594 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 PDIA5Q14554 519 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 MCM6Q14566 821 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 TBC1D10BQ4KMP7 808 aaPredicted RBP10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 FCHSD1Q86WN1 690 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 CCDC47Q96A33 483 aaKnown RBP10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 TRIM49BA6NDI0 452 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 USP27XA6NNY8 438 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 KLRC4O43908 158 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 CCT6AP40227 531 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms