RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 NRBP1Q9UHY1 535 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 ZHX1Q9UKY1 873 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-216ENST00000446646 MTUS1Q9ULD2 1270 aa8.63□□□□□ -1.03
HDAC9-216ENST00000446646 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-216ENST00000446646 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
HDAC9-216ENST00000446646 COL4A4P53420 1690 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-216ENST00000446646 ASTN1O14525 1302 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 MROH7Q68CQ1 1323 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 B4GALT4O60513 344 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 CIAO1O76071 339 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 HMGB1P09429 215 aaKnown RBP8.62□□□□□ -1.03
HDAC9-216ENST00000446646 CST5P28325 142 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-216ENST00000446646 SHMT1P34896 483 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 MCAMP43121 646 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 USP14P54578 494 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 PSMC6P62333 389 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 ZP2Q05996 745 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 SIAH1Q8IUQ4 282 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 SPICE1Q8N0Z3 855 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 SPATA5Q8NB90 893 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 SLC43A3Q8NBI5 491 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 PPP1R13LQ8WUF5 828 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 FGD4Q96M96 766 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 UPF3AQ9H1J1 476 aaKnown RBP8.62□□□□□ -1.03
HDAC9-216ENST00000446646 MTIF3Q9H2K0 278 aaKnown RBP8.62□□□□□ -1.03
HDAC9-216ENST00000446646 MROH8Q9H579 483 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 FBXO28Q9NVF7 368 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 MUTYHQ9UIF7 546 aa8.62□□□□□ -1.03
HDAC9-216ENST00000446646 CACNA1FO60840 1977 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 ZNFX1Q9P2E3 1918 aaKnown RBP8.61□□□□□ -1.03
HDAC9-216ENST00000446646 A0A1B0GUL7 405 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-216ENST00000446646 KDM4AO75164 1064 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 DUSP11O75319 330 aaKnown RBP8.61□□□□□ -1.03
HDAC9-216ENST00000446646 MAP4K4O95819 1239 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-216ENST00000446646 LDHCP07864 332 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 CYP2C9P11712 490 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 GSTO1P78417 241 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 FOXK2Q01167 660 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 TFCP2Q12800 502 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 ABCB5Q2M3G0 1257 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 GNASQ5JWF2 1037 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 TMEM63BQ5T3F8 832 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 HERC6Q8IVU3 1022 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 TET1Q8NFU7 2136 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 SUGCTQ9HAC7 445 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 GOPCQ9HD26 462 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 HOXC10Q9NYD6 342 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 FAM184BQ9ULE4 1060 aa8.61□□□□□ -1.03
HDAC9-216ENST00000446646 MAP1BP46821 2468 aaKnown RBP8.6□□□□□ -1.03
HDAC9-216ENST00000446646 CDK5RAP2Q96SN8 1893 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 SCN5AQ14524 2016 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 TLR3O15455 904 aaKnown RBP8.6□□□□□ -1.03
HDAC9-216ENST00000446646 FLOT1O75955 427 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 IRS1P35568 1242 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 IL15P40933 162 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-216ENST00000446646 PLCD1P51178 756 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 GJA9P57773 515 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 CCDC144BQ3MJ40 725 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 CERKLQ49MI3 558 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-216ENST00000446646 ASCL5Q7RTU5 278 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-216ENST00000446646 KATNBL1Q9H079 304 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
HDAC9-216ENST00000446646 CNPY2Q9Y2B0 182 aa8.6□□□□□ -1.03
HDAC9-216ENST00000446646 COL4A6Q14031 1691 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 USP24Q9UPU5 2620 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 E9PSI1 815 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 ACVR2BQ13705 512 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 TCTN1Q2MV58 587 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 NAA16Q6N069 864 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-216ENST00000446646 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 MIGA1Q8NAN2 632 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 REPS2Q8NFH8 660 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 NEK9Q8TD19 979 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-216ENST00000446646 MFSD14AQ96MC6 490 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 LRP2BPQ9P2M1 347 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 RIPK3Q9Y572 518 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 ASPMQ8IZT6 3477 aa8.59□□□□□ -1.03
HDAC9-216ENST00000446646 FASNP49327 2511 aaKnown RBP8.59□□□□□ -1.03
HDAC9-216ENST00000446646 ZNF536O15090 1300 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 MED19A0JLT2 244 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-216ENST00000446646 HLA-DOAP06340 250 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 VCPP55072 806 aaKnown RBP8.58□□□□□ -1.04
HDAC9-216ENST00000446646 ITGA7Q13683 1181 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 KCTD2Q14681 263 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 RIOX2Q8IUF8 465 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 RPUSD2Q8IZ73 545 aaKnown RBP8.58□□□□□ -1.04
HDAC9-216ENST00000446646 MB21D1Q8N884 522 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 PCSK9Q8NBP7 692 aaKnown RBP8.58□□□□□ -1.04
HDAC9-216ENST00000446646 NEUROD6Q96NK8 337 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 PIH1D3Q9NQM4 214 aaKnown RBP8.58□□□□□ -1.04
HDAC9-216ENST00000446646 SERPINB13Q9UIV8 391 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 ZNF214Q9UL59 606 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms