RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MAGEA1P43355 309 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 RCAN1P53805 252 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 ELMOD1Q8N336 334 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 MMS19Q96T76 1030 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 HEXIM1O94992 359 aaKnown RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 TNFAIP2Q03169 654 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 BZW1Q7L1Q6 419 aaKnown RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 NEK9Q8TD19 979 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 KIAA1586Q9HCI6 787 aa9.37□□□□□ -0.91
PTPN3-204ENST00000446349 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-204ENST00000446349 PAK2Q13177 524 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 FAM47AQ5JRC9 791 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 B4GALNT4Q76KP1 1039 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 A6NJR5 290 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 MMP10P09238 476 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ANXA13P27216 316 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 PPFIA1Q13136 1202 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 CCDC121Q6ZUS5 278 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 INTS8Q75QN2 995 aaKnown RBP9.36□□□□□ -0.91
PTPN3-204ENST00000446349 WDR70Q9NW82 654 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 GARSP41250 739 aaKnown RBP9.36□□□□□ -0.91
PTPN3-204ENST00000446349 BRINP3Q76B58 766 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 SELENOSQ9BQE4 189 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 VPS16Q9H269 839 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 SPON1Q9HCB6 807 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 PIK3CAP42336 1068 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ASIC3Q9UHC3 531 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ADD2P35612 726 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
PTPN3-204ENST00000446349 CCHCR1Q8TD31 782 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ANAPC5Q9UJX4 755 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.36□□□□□ -0.91
PTPN3-204ENST00000446349 MAP3K21Q5TCX8 1036 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 VCXQ9H320 206 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 KCNK9Q9NPC2 374 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ZBTB1Q9Y2K1 713 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 FGAP02671 866 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 RBM10P98175 930 aaKnown RBP9.36□□□□□ -0.91
PTPN3-204ENST00000446349 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 PHKBQ93100 1093 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 TACC3Q9Y6A5 838 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 FRMPD1Q5SYB0 1578 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 CDHR2Q9BYE9 1310 aa9.36□□□□□ -0.91
PTPN3-204ENST00000446349 PPP6R2O75170 966 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 IRX4P78413 519 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 FANCCQ00597 558 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 ZC3H15Q8WU90 426 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 UBLCP1Q8WVY7 318 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 HOMER3Q9NSC5 361 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 HERC5Q9UII4 1024 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PPFIA3O75145 1194 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 CMA1P23946 247 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 TERF1P54274 439 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 MAEAQ7L5Y9 396 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 THEM5Q8N1Q8 247 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 UBE2Q2Q8WVN8 375 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 DHTKD1Q96HY7 919 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 SLC16A10Q8TF71 515 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 CDKL2Q92772 493 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 SEC62Q99442 399 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 SUGCTQ9HAC7 445 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PSMC2P35998 433 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 KPNA2P52292 529 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 ASPHQ12797 758 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PALM2Q8IXS6 379 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 URGCPQ8TCY9 931 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 ATRIPQ8WXE1 791 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 NT5C1BQ96P26 610 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PNMA6FA0A0J9YX94 578 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 DNAJC21Q5F1R6 531 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 FRMPD2Q68DX3 1309 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 GJD4Q96KN9 370 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 BRIP1Q9BX63 1249 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PPANQ9NQ55 473 aaKnown RBP9.35□□□□□ -0.91
PTPN3-204ENST00000446349 ALKQ9UM73 1620 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 AFG3L2Q9Y4W6 797 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 EBAG9O00559 213 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 FAM26FQ5R3K3 315 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 DYMQ7RTS9 669 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 OR8K1Q8NGG5 319 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 FAM76AQ8TAV0 307 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 PPP4R1Q8TF05 950 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 EDEM3Q9BZQ6 932 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 CASC4Q6P4E1 433 aa9.35□□□□□ -0.91
PTPN3-204ENST00000446349 FMNL1O95466 1100 aaPredicted RBP9.34□□□□□ -0.91
PTPN3-204ENST00000446349 RASSF2P50749 326 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms