RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TRHRP34981 398 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 KCNJ6P48051 423 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 RTP1P59025 263 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 KCNAB2Q13303 367 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 INF2Q27J81 1249 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 FYB2Q5VWT5 728 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 CEP128Q6ZU80 1094 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 NLGN2Q8NFZ4 835 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 ASIC4Q96FT7 647 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 ACSL6Q9UKU0 697 aa6.47□□□□□ -1.37
HMGB1P48-201ENST00000446155 CCDC163A0A0D9SF12 145 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 ESYT3A0FGR9 886 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 WTIPA6NIX2 430 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 ENPP3O14638 875 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 MEFVO15553 781 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 PSPNO60542 156 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 LTBRP36941 435 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 CORO7P57737 925 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 KIR3DS1Q14943 382 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 CPNE8Q86YQ8 564 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 CDC6Q99741 560 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 C19orf44Q9H6X5 657 aa6.46□□□□□ -1.38
HMGB1P48-201ENST00000446155 ASXL2Q76L83 1435 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 C7orf72A4D263 438 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 PPP1R11O60927 126 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 MSL3P1P0C860 447 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 RAC2P15153 192 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 AFMP43652 599 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 MVKQ03426 396 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 LAPTM5Q13571 262 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 SNX17Q15036 470 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 TRIM61Q5EBN2 209 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 IQCEQ6IPM2 695 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 STYK1Q6J9G0 422 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 GALNT18Q6P9A2 607 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 RSPO2Q6UXX9 243 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 MYLIPQ8WY64 445 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 DPF3Q92784 378 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 DIO2Q92813 273 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 CWC22Q9HCG8 908 aaKnown RBP6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 IMPACTQ9P2X3 320 aa6.45□□□□□ -1.38
HMGB1P48-201ENST00000446155 BLACEA4D250 179 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 KCNQ2O43526 872 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 LCP1P13796 627 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 SLC14A2Q15849 920 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 Q8N1Y9 231 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 DCAF4Q8WV16 495 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 MTA3Q9BTC8 594 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 RNF32Q9H0A6 362 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 GPR27Q9NS67 375 aa6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 TMA7Q9Y2S6 64 aaKnown RBP6.44□□□□□ -1.38
HMGB1P48-201ENST00000446155 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 MSCO60682 206 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 SDE2Q6IQ49 451 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 KCNT2Q6UVM3 1135 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 USP53Q70EK8 1073 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 GSTCDQ8NEC7 633 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 ABHD4Q8TB40 342 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 ZFYVE21Q9BQ24 234 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 PHF20Q9BVI0 1012 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 MRPL4Q9BYD3 311 aaKnown RBP6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 NCOA5Q9HCD5 579 aaKnown RBP6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 CRTAC1Q9NQ79 661 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 FANCLQ9NW38 375 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 FBLN5Q9UBX5 448 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 FBXL7Q9UJT9 491 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 TAF6LQ9Y6J9 622 aa6.43□□□□□ -1.38
HMGB1P48-201ENST00000446155 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 ANKRD62A6NC57 917 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 PLD2O14939 933 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 NPHS1O60500 1241 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 PNLIPP16233 465 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 JUNBP17275 347 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 GABREP78334 506 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 TKFCQ3LXA3 575 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 PLEKHG4Q58EX7 1191 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 MAMDC2Q7Z304 686 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 KIAA0907Q7Z7F0 614 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 JAMLQ86YT9 394 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 ANKRD13AQ8IZ07 590 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 SYNPOQ8N3V7 929 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 PTPRN2Q92932 1015 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 TNFRSF12AQ9NP84 129 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 GPR160Q9UJ42 338 aa6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 YBX2Q9Y2T7 364 aaKnown RBP6.42□□□□□ -1.38
HMGB1P48-201ENST00000446155 BIN1O00499 593 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 PPP1R12AO14974 1030 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 PRKCAP17252 672 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 IRAK1P51617 712 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 RBM10P98175 930 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms