RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 MYADML2A6NDP7 307 aa21.82■■□□□ 1.08
HDAC4-203ENST00000445704 DUSP11O75319 330 aaKnown RBP21.82■■□□□ 1.08
HDAC4-203ENST00000445704 PTGS1P23219 599 aa21.82■■□□□ 1.08
HDAC4-203ENST00000445704 ADCYAP1R1P41586 468 aa21.82■■□□□ 1.08
HDAC4-203ENST00000445704 ATN1P54259 1190 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-203ENST00000445704 TAPT1Q6NXT6 567 aa21.82■■□□□ 1.08
HDAC4-203ENST00000445704 CTCFLQ8NI51 663 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-203ENST00000445704 FERMT2Q96AC1 680 aa21.82■■□□□ 1.08
HDAC4-203ENST00000445704 MRPL11Q9Y3B7 192 aaKnown RBP21.82■■□□□ 1.08
HDAC4-203ENST00000445704 PLEKHA8P1O95397 391 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 EDNRBP24530 442 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 KRT32Q14532 448 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 TMEM63BQ5T3F8 832 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 DHX32Q7L7V1 743 aaKnown RBP21.81■■□□□ 1.08
HDAC4-203ENST00000445704 RNF180Q86T96 592 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 SGMS1Q86VZ5 419 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 SYTL5Q8TDW5 730 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-203ENST00000445704 PIBF1Q8WXW3 757 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 PCDH10Q9P2E7 1040 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 PHF24Q9UPV7 400 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 PCDHA1Q9Y5I3 950 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 SNX14Q9Y5W7 946 aa21.81■■□□□ 1.08
HDAC4-203ENST00000445704 BAZ2BQ9UIF8 2168 aaKnown RBP21.81■■□□□ 1.08
HDAC4-203ENST00000445704 LOC102724159A0A0B4J2E5 919 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 REC8O95072 547 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 CPA1P15085 419 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 KIF5BP33176 963 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 TNFAIP2Q03169 654 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 PWP2Q15269 919 aaKnown RBP21.8■■□□□ 1.08
HDAC4-203ENST00000445704 MCF2L2Q86YR7 1114 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
HDAC4-203ENST00000445704 KLHDC9Q8NEP7 349 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 DNERQ8NFT8 737 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 SPZ1Q9BXG8 430 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 UPF3AQ9H1J1 476 aaKnown RBP21.8■■□□□ 1.08
HDAC4-203ENST00000445704 VTA1Q9NP79 307 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 ZMYND8Q9ULU4 1186 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-203ENST00000445704 SLC12A7Q9Y666 1083 aa21.8■■□□□ 1.08
HDAC4-203ENST00000445704 PNMA6FA0A0J9YX94 578 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 CTAGE5O15320 804 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 SMPD1P17405 629 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 GJA9P57773 515 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 CCSAPQ6IQ19 270 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-203ENST00000445704 SLC39A5Q6ZMH5 540 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
HDAC4-203ENST00000445704 TAAR1Q96RJ0 339 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 MAF1Q9H063 256 aa21.79■■□□□ 1.08
HDAC4-203ENST00000445704 GNEQ9Y223 722 aaKnown RBP21.79■■□□□ 1.08
HDAC4-203ENST00000445704 CFBP00751 764 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 C6orf222P0C671 652 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-203ENST00000445704 CALM1P0DP23 149 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 CALM2P0DP24 149 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 CALM3P0DP25 149 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-203ENST00000445704 HSD17B4P51659 736 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 GHRHRQ02643 423 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 APOA5Q6Q788 366 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 MICU3Q86XE3 530 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 JAKMIP1Q96N16 626 aaKnown RBP21.78■■□□□ 1.08
HDAC4-203ENST00000445704 BRPF3Q9ULD4 1205 aa21.78■■□□□ 1.08
HDAC4-203ENST00000445704 COLQQ9Y215 455 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-203ENST00000445704 A0A1W2PQ45 241 aaPredicted RBP21.77■■□□□ 1.08
HDAC4-203ENST00000445704 A0A1W2PQY0 241 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 SYN1P17600 705 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 ACLYP53396 1101 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 RTP1P59025 263 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 PDE4DQ08499 809 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 SNX17Q15036 470 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 KCNA10Q16322 511 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 CHRDL2Q6WN34 429 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 FANCBQ8NB91 859 aa21.77■■□□□ 1.08
HDAC4-203ENST00000445704 TSEN34Q9BSV6 310 aaKnown RBP21.77■■□□□ 1.08
HDAC4-203ENST00000445704 CEP290O15078 2479 aa21.77■■□□□ 1.07
HDAC4-203ENST00000445704 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
HDAC4-203ENST00000445704 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
HDAC4-203ENST00000445704 GNAQP50148 359 aa21.76■■□□□ 1.07
HDAC4-203ENST00000445704 NKX3-2P78367 333 aa21.76■■□□□ 1.07
HDAC4-203ENST00000445704 IQSEC1Q6DN90 963 aa21.76■■□□□ 1.07
HDAC4-203ENST00000445704 NOL8Q76FK4 1167 aaKnown RBP21.76■■□□□ 1.07
HDAC4-203ENST00000445704 TLK2Q86UE8 772 aa21.76■■□□□ 1.07
HDAC4-203ENST00000445704 RBM47A0AV96 593 aaKnown RBP21.75■■□□□ 1.07
HDAC4-203ENST00000445704 HOXA13P31271 388 aaPredicted RBP21.75■■□□□ 1.07
HDAC4-203ENST00000445704 BEX3Q00994 111 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 TRIM60Q495X7 471 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 TMTC3Q6ZXV5 915 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 RRP36Q96EU6 259 aaKnown RBP21.75■■□□□ 1.07
HDAC4-203ENST00000445704 RMDN3Q96TC7 470 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 LZTS2Q9BRK4 669 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 ATP11BQ9Y2G3 1177 aa21.75■■□□□ 1.07
HDAC4-203ENST00000445704 MOXD2PA6NHM9 499 aa21.74■■□□□ 1.07
HDAC4-203ENST00000445704 EPB41L2O43491 1005 aaKnown RBP21.74■■□□□ 1.07
HDAC4-203ENST00000445704 ASGR1P07306 291 aa21.74■■□□□ 1.07
HDAC4-203ENST00000445704 EIF2AK2P19525 551 aaKnown RBP21.74■■□□□ 1.07
HDAC4-203ENST00000445704 GNASQ5JWF2 1037 aa21.74■■□□□ 1.07
HDAC4-203ENST00000445704 NSUN6Q8TEA1 469 aaKnown RBP21.74■■□□□ 1.07
HDAC4-203ENST00000445704 MPHOSPH6Q99547 160 aaKnown RBP21.74■■□□□ 1.07
HDAC4-203ENST00000445704 WDR11Q9BZH6 1224 aa21.74■■□□□ 1.07
HDAC4-203ENST00000445704 PRO3102Q9H379 93 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms