RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 STX6O43752 255 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 STAM2O75886 525 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 HOXC6P09630 235 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 TRIM29Q14134 588 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 NIPA1Q7RTP0 329 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 DNERQ8NFT8 737 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
FXR1-203ENST00000445140 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 CCPG1Q9ULG6 757 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
FXR1-203ENST00000445140 MEIS2O14770 477 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 KRT2P35908 639 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 MAP2K1Q02750 393 aaPredicted RBP10.06□□□□□ -0.8
FXR1-203ENST00000445140 RESTQ13127 1097 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 DGKZQ13574 1117 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 NOL8Q76FK4 1167 aaKnown RBP10.06□□□□□ -0.8
FXR1-203ENST00000445140 RAB11FIP4Q86YS3 637 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 BLIDQ8IZY5 108 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 USP6NLQ92738 828 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 MOV10L1Q9BXT6 1211 aaKnown RBP10.06□□□□□ -0.8
FXR1-203ENST00000445140 EHMT1Q9H9B1 1298 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 NAP1L2Q9ULW6 460 aaPredicted RBP10.06□□□□□ -0.8
FXR1-203ENST00000445140 SLC15A5A6NIM6 579 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
FXR1-203ENST00000445140 CIITAP33076 1130 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 NAPAP54920 295 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 PRMT2P55345 433 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 GRB14Q14449 540 aa10.06□□□□□ -0.8
FXR1-203ENST00000445140 SAFBQ15424 915 aaKnown RBP eCLIP10.06□□□□□ -0.8
FXR1-203ENST00000445140 LARP1BQ659C4 914 aaKnown RBP10.06□□□□□ -0.8
FXR1-203ENST00000445140 CYP3A7-CYP3A51PA0A087WV96 503 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 CDK11BP21127 795 aaKnown RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 CYP3A7P24462 503 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 EDNRBP24530 442 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 SREBF1P36956 1147 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 IKQ13123 557 aaPredicted RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 TAF1CQ15572 869 aaPredicted RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 DNAJC5GQ8N7S2 189 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 IWS1Q96ST2 819 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 TXNRD2Q9NNW7 524 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 RNF146Q9NTX7 359 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 NRBP1Q9UHY1 535 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 HSP90AA1P07900 732 aaKnown RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 GCFC2P16383 781 aaKnown RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 HEATR3Q7Z4Q2 680 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 TRMT44Q8IYL2 757 aaKnown RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 REXO1Q8N1G1 1221 aaKnown RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 FAM133AQ8N9E0 248 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 SOCS4Q8WXH5 440 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 CTDP1Q9Y5B0 961 aaPredicted RBP10.05□□□□□ -0.8
FXR1-203ENST00000445140 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 LOXHD1Q8IVV2 1947 aa10.05□□□□□ -0.8
FXR1-203ENST00000445140 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 GCOM1H8Y6P7 765 aaPredicted RBP10.04□□□□□ -0.8
FXR1-203ENST00000445140 SLC26A4O43511 780 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 BMP15O95972 392 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 POLR2MP0CAP2 368 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 USP11P51784 963 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 MORN1Q5T089 497 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 TRERF1Q96PN7 1200 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 CPVLQ9H3G5 476 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 PSTPIP2Q9H939 334 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 PCDHA6Q9UN73 950 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 PCDHA8Q9Y5H6 950 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 F13A1P00488 732 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 CRHR2Q13324 411 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 RILPL1Q5EBL4 403 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 MAMDC4Q6UXC1 1216 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 NOSTRINQ8IVI9 506 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 CMTR1Q8N1G2 835 aaKnown RBP10.04□□□□□ -0.8
FXR1-203ENST00000445140 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
FXR1-203ENST00000445140 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 RAVER2Q9HCJ3 691 aaKnown RBP10.04□□□□□ -0.8
FXR1-203ENST00000445140 CYP39A1Q9NYL5 469 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 ZDHHC9Q9Y397 364 aa10.04□□□□□ -0.8
FXR1-203ENST00000445140 B4DLN1 442 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 XRCC5P13010 732 aaKnown RBP10.03□□□□□ -0.8
FXR1-203ENST00000445140 PTPREP23469 700 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 NLRP5P59047 1200 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 OLFML2BQ68BL8 750 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 PPP4R3AQ6IN85 833 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 DIS3L2Q8IYB7 885 aaKnown RBP10.03□□□□□ -0.8
FXR1-203ENST00000445140 GPKOWQ92917 476 aaPredicted RBP eCLIP10.03□□□□□ -0.8
FXR1-203ENST00000445140 DDX11Q96FC9 970 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 RNF186Q9NXI6 227 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 UTRNP46939 3433 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 LAD1O00515 517 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 HOMER1Q86YM7 354 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 SYTL5Q8TDW5 730 aaPredicted RBP10.03□□□□□ -0.8
FXR1-203ENST00000445140 COA7Q96BR5 231 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 A1CFQ9NQ94 594 aaKnown RBP10.03□□□□□ -0.8
FXR1-203ENST00000445140 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
FXR1-203ENST00000445140 FRMPD3Q5JV73 1810 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms