RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 NRBP1Q9UHY1 535 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 ELP1O95163 1332 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 ANKRD11Q6UB99 2663 aaPredicted RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 DMXL1Q9Y485 3027 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 VPS13AQ96RL7 3174 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 MAP1BP46821 2468 aaKnown RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 NMT2O60551 498 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 COBLO75128 1261 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 USP14P54578 494 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 ASCL5Q7RTU5 278 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 FAM126BQ8IXS8 530 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 ATOH1Q92858 354 aaPredicted RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 CEP95Q96GE4 821 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 CNTNAP3BQ96NU0 1288 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 CNTNAP3Q9BZ76 1288 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 UPF3BQ9BZI7 483 aaKnown RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 TANGO6Q9C0B7 1094 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 KANSL2Q9H9L4 492 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 PRKAG3Q9UGI9 489 aa10.89□□□□□ -0.67
LINC00642-203ENST00000444942 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
LINC00642-203ENST00000444942 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 PTPRSQ13332 1948 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 ZBBXA8MT70 800 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 TLR3O15455 904 aaKnown RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 SGSM2O43147 1006 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 ARHGEF15O94989 841 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 VCAM1P19320 739 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 NEDD4P46934 1319 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 SCN5AQ14524 2016 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 IMMTQ16891 758 aaKnown RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 HERC4Q5GLZ8 1057 aaPredicted RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 CCSAPQ6IQ19 270 aaPredicted RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 MFSD6Q6ZSS7 791 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 LRRC47Q8N1G4 583 aaKnown RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 KLHDC9Q8NEP7 349 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 RAD50Q92878 1312 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 MAML3Q96JK9 1138 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 GLT1D1Q96MS3 346 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 NUP88Q99567 741 aaPredicted RBP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 ZKSCAN3Q9BRR0 538 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 ESYT1Q9BSJ8 1104 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 DSCC1Q9BVC3 393 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 SLC5A4Q9NY91 659 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 ANAPC4Q9UJX5 808 aa10.88□□□□□ -0.67
LINC00642-203ENST00000444942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00642-203ENST00000444942 SIP14410 1827 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 UMODL1Q5DID0 1318 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 SOWAHBA6NEL2 793 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 PRR23AA6NEV1 266 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 B4E1Z4 1266 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 ARVCFO00192 962 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 CD4P01730 458 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 IRS1P35568 1242 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 KCNA10Q16322 511 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 SUGP1Q8IWZ8 645 aaKnown RBP10.87□□□□□ -0.67
LINC00642-203ENST00000444942 RPUSD2Q8IZ73 545 aaKnown RBP10.87□□□□□ -0.67
LINC00642-203ENST00000444942 NEDD1Q8NHV4 660 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 ANO2Q9NQ90 1003 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 STX8Q9UNK0 236 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 TRPC6Q9Y210 931 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
LINC00642-203ENST00000444942 ZMYM6O95789 1325 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 SYNRGQ9UMZ2 1314 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 IGKV6D-41A0A0C4DH26 115 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 CATSPERGQ6ZRH7 1159 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 NEK9Q8TD19 979 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 EDAQ92838 391 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 LENG1Q96BZ8 264 aaPredicted RBP10.86□□□□□ -0.67
LINC00642-203ENST00000444942 VWCEQ96DN2 955 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 HIPK3Q9H422 1215 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 SH2D4AQ9H788 454 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 VCPKMTQ9H867 229 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 IL17RBQ9NRM6 502 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 MTMR4Q9NYA4 1195 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 MUTYHQ9UIF7 546 aa10.86□□□□□ -0.67
LINC00642-203ENST00000444942 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
LINC00642-203ENST00000444942 USP24Q9UPU5 2620 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 A0A0U1RQG5 324 aaPredicted RBP10.85□□□□□ -0.67
LINC00642-203ENST00000444942 ORC4O43929 436 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 KDM4AO75164 1064 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms