RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LRWD1Q9UFC0 647 aa17.66■□□□□ 0.42
SNX13-204ENST00000444712 PP2D1A8MPX8 630 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 TDP2O95551 362 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 ATP1A3P13637 1013 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 ZNF18P17022 549 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
SNX13-204ENST00000444712 FMR1Q06787 632 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNX13-204ENST00000444712 FILIP1Q7Z7B0 1213 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 FAM160B2Q86V87 743 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 MTRQ99707 1265 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 SGIP1Q9BQI5 828 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 ANO3Q9BYT9 981 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 BLZF1Q9H2G9 400 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 PLCG1P19174 1290 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 PPP1R2P41236 205 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 R3HDM1Q15032 1099 aaKnown RBP17.65■□□□□ 0.42
SNX13-204ENST00000444712 NBPF9Q3BBW0 867 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 TMC6Q7Z403 805 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 STAMQ92783 540 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 CDK5RAP3Q96JB5 506 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
SNX13-204ENST00000444712 LRRC27Q9C0I9 530 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 VCPKMTQ9H867 229 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 PGAP2Q9UHJ9 254 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 PRR12Q9ULL5 1215 aa17.65■□□□□ 0.42
SNX13-204ENST00000444712 PPP1R3GB7ZBB8 358 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 SLC37A4O43826 429 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 MARCH6O60337 910 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 CASP1P29466 404 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 STIM1Q13586 685 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 CACTINQ8WUQ7 758 aaKnown RBP17.64■□□□□ 0.41
SNX13-204ENST00000444712 CTAGE1Q96RT6 745 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 RWDD2AQ9UIY3 292 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 CYP3A7-CYP3A51PA0A087WV96 503 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 CYP3A7P24462 503 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 KRT79Q5XKE5 535 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 PYCARDQ9ULZ3 195 aa17.64■□□□□ 0.41
SNX13-204ENST00000444712 DICER1Q9UPY3 1922 aaKnown RBP17.63■□□□□ 0.41
SNX13-204ENST00000444712 KDM3AQ9Y4C1 1321 aa17.63■□□□□ 0.41
SNX13-204ENST00000444712 ECE1P42892 770 aa17.63■□□□□ 0.41
SNX13-204ENST00000444712 PAK1Q13153 545 aa17.63■□□□□ 0.41
SNX13-204ENST00000444712 TPD52L1Q16890 204 aaPredicted RBP17.63■□□□□ 0.41
SNX13-204ENST00000444712 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
SNX13-204ENST00000444712 SLFN12Q8IYM2 578 aa17.63■□□□□ 0.41
SNX13-204ENST00000444712 C7orf25Q9BPX7 421 aa17.63■□□□□ 0.41
SNX13-204ENST00000444712 USP17L15C9J2P7 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L13C9JLJ4 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L11C9JVI0 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L18D6R9N7 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L22D6RA61 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L17D6RBQ6 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L19D6RCP7 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L20D6RJB6 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 FZD9O00144 591 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 MEIS2O14770 477 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 EDIL3O43854 480 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 RHOBTB3O94955 611 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 SPAG1Q07617 926 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L24Q0WX57 530 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 RASA3Q14644 834 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 KLHL10Q6JEL2 608 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USP17L6PQ6QN14 398 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 ACER1Q8TDN7 264 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 MBOAT7Q96N66 472 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 STK24Q9Y6E0 443 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 TBX3O15119 743 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 CD44P16070 742 aaKnown RBP17.62■□□□□ 0.41
SNX13-204ENST00000444712 SFPQP23246 707 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNX13-204ENST00000444712 TERF1P54274 439 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 LRMPQ12912 555 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 FAM83BQ5T0W9 1011 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 VSTM4Q8IW00 320 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 SPICE1Q8N0Z3 855 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
SNX13-204ENST00000444712 CTNND2Q9UQB3 1225 aa17.62■□□□□ 0.41
SNX13-204ENST00000444712 USH1GQ495M9 461 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 FILIP1LQ4L180 1135 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 DNTTIP2Q5QJE6 756 aaKnown RBP17.61■□□□□ 0.41
SNX13-204ENST00000444712 SV2BQ7L1I2 683 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 ANKRD20A12PQ8NF67 263 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 NT5C3AQ9H0P0 336 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 RANBP17Q9H2T7 1088 aaKnown RBP17.61■□□□□ 0.41
SNX13-204ENST00000444712 EHMT1Q9H9B1 1298 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 PCDHA12Q9UN75 941 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 DOCK1Q14185 1865 aa17.61■□□□□ 0.41
SNX13-204ENST00000444712 SREBF1P36956 1147 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 KMT5BQ4FZB7 885 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 MICALL2Q8IY33 904 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 CCDC112Q8NEF3 446 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 SNX29Q8TEQ0 813 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 TRIM9Q9C026 710 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 SKILP12757 684 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
SNX13-204ENST00000444712 ARHGAP4P98171 946 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms