RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-215ENST00000444609 SNRNP48Q6IEG0 339 aaKnown RBP12.43□□□□□ -0.42
HDAC8-215ENST00000444609 NFRKBQ6P4R8 1299 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 FBXO11Q86XK2 927 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 SMRP1Q8NCR6 262 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 CHAMP1Q96JM3 812 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 IGFLR1Q9H665 355 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 CEP250Q9BV73 2442 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 FANCIQ9NVI1 1328 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 PARNO95453 639 aaKnown RBP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 SELPP16109 830 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 ARID4AP29374 1257 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 USP5P45974 858 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 COASYQ13057 564 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 KIAA0319Q5VV43 1072 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 TMEM179Q6ZVK1 233 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 ANKRD35Q8N283 1001 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 CAGE1Q8TC20 777 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 MTG1Q9BT17 334 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 SH2D4AQ9H788 454 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 ARHGEF10LQ9HCE6 1279 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 CLEC1BQ9P126 229 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 PA2G4Q9UQ80 394 aaKnown RBP12.42□□□□□ -0.42
HDAC8-215ENST00000444609 AKAP2Q9Y2D5 859 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
HDAC8-215ENST00000444609 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 NDUFV1P49821 464 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 CLCN5P51795 746 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 TAPT1Q6NXT6 567 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 LRRC8DQ7L1W4 858 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 LMAN2LQ9H0V9 348 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 USP15Q9Y4E8 981 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-215ENST00000444609 FAM208BQ5VWN6 2430 aa12.41□□□□□ -0.42
HDAC8-215ENST00000444609 GPR179Q6PRD1 2367 aa12.4□□□□□ -0.42
HDAC8-215ENST00000444609 MYL3P08590 195 aa12.4□□□□□ -0.42
HDAC8-215ENST00000444609 ATXN1P54253 815 aaKnown RBP12.4□□□□□ -0.42
HDAC8-215ENST00000444609 CNTN2Q02246 1040 aa12.4□□□□□ -0.42
HDAC8-215ENST00000444609 FAM133AQ8N9E0 248 aa12.4□□□□□ -0.42
HDAC8-215ENST00000444609 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
HDAC8-215ENST00000444609 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-215ENST00000444609 COL11A1P12107 1806 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-215ENST00000444609 ASB14A6NK59 587 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 GRM6O15303 877 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 AMHP03971 560 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 TFCP2Q12800 502 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 GORABQ5T7V8 394 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 CTAGE1Q96RT6 745 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 HAUS7Q99871 368 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
HDAC8-215ENST00000444609 SPTBN2O15020 2390 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 IGSF3O75054 1194 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 RB1P06400 928 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 ADRB1P08588 477 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 ATF7P17544 494 aaPredicted RBP12.38□□□□□ -0.43
HDAC8-215ENST00000444609 SDHBP21912 280 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 CPT1AP50416 773 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 ICA1Q05084 483 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 RBL2Q08999 1139 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 PTGISQ16647 500 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 FAM83BQ5T0W9 1011 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 ZBTB33Q86T24 672 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 UBALD2Q8IYN6 164 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 MYOCDQ8IZQ8 938 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 KREMEN2Q8NCW0 462 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 RUBCNQ92622 972 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 YME1L1Q96TA2 773 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
HDAC8-215ENST00000444609 MYO7AQ13402 2215 aa12.38□□□□□ -0.43
HDAC8-215ENST00000444609 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 USP17L21D6R901 530 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 RBAK-RBAKDNI3L0D1 243 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
HDAC8-215ENST00000444609 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 CYP7A1P22680 504 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 EVX2Q03828 476 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 DUSP28Q4G0W2 176 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 EFHBQ8N7U6 833 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 CYP2W1Q8TAV3 490 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 DHX38Q92620 1227 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms