RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CDK7P50613 346 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 TAPT1Q6NXT6 567 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 EEPD1Q7L9B9 569 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 MORC4Q8TE76 937 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 PDGFCQ9NRA1 345 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 PNMA2Q9UL42 364 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 COL6A3P12111 3177 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 SMPD1P17405 629 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 BEX3Q00994 111 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
TREX1-202ENST00000444177 SEC23AQ15436 765 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 CHST3Q7LGC8 479 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 UBA5Q9GZZ9 404 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 CPVLQ9H3G5 476 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
TREX1-202ENST00000444177 LTBP2Q14767 1821 aa16.35■□□□□ 0.21
TREX1-202ENST00000444177 A0A0U1RQG5 324 aaPredicted RBP16.34■□□□□ 0.21
TREX1-202ENST00000444177 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 ARVCFO00192 962 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 SLC27A2O14975 620 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 DYNC1LI2O43237 492 aaPredicted RBP16.34■□□□□ 0.21
TREX1-202ENST00000444177 DHX16O60231 1041 aaKnown RBP16.34■□□□□ 0.21
TREX1-202ENST00000444177 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
TREX1-202ENST00000444177 EPHB4P54760 987 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 WTAPQ15007 396 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
TREX1-202ENST00000444177 FBXO16Q8IX29 292 aaPredicted RBP16.34■□□□□ 0.21
TREX1-202ENST00000444177 AP5M1Q9H0R1 490 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 VTA1Q9NP79 307 aa16.34■□□□□ 0.21
TREX1-202ENST00000444177 TIMP1P01033 207 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 PTGS1P23219 599 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 CALML3P27482 149 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 ALDH5A1P51649 535 aaPredicted RBP16.33■□□□□ 0.2
TREX1-202ENST00000444177 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
TREX1-202ENST00000444177 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 TMEM63BQ5T3F8 832 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 TLK2Q86UE8 772 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
TREX1-202ENST00000444177 TBX21Q9UL17 535 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 Q9Y3F1 56 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
TREX1-202ENST00000444177 A0A0C4DFX4 3053 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 LOC102724159A0A0B4J2E5 919 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 CABYRO75952 493 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 ANTXR2P58335 489 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 FPGSQ05932 587 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 PWP2Q15269 919 aaKnown RBP16.32■□□□□ 0.2
TREX1-202ENST00000444177 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
TREX1-202ENST00000444177 USH1GQ495M9 461 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 STXBP5LQ9Y2K9 1186 aa16.32■□□□□ 0.2
TREX1-202ENST00000444177 PRC1O43663 620 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 ZEB2O60315 1214 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 RPS6P62753 249 aaKnown RBP16.31■□□□□ 0.2
TREX1-202ENST00000444177 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 DUSP28Q4G0W2 176 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 RNF20Q5VTR2 975 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 FAM126BQ8IXS8 530 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 SLC43A3Q8NBI5 491 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
TREX1-202ENST00000444177 RBM47A0AV96 593 aaKnown RBP16.3■□□□□ 0.2
TREX1-202ENST00000444177 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
TREX1-202ENST00000444177 MFSD5Q6N075 450 aa16.3■□□□□ 0.2
TREX1-202ENST00000444177 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
TREX1-202ENST00000444177 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
TREX1-202ENST00000444177 LRRC37A2A6NM11 1700 aa16.3■□□□□ 0.2
TREX1-202ENST00000444177 CUL9Q8IWT3 2517 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 LCTP09848 1927 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 CD4P01730 458 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 MCM5P33992 734 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 SMAD3P84022 425 aaKnown RBP16.29■□□□□ 0.2
TREX1-202ENST00000444177 ITGA7Q13683 1181 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 GRM4Q14833 912 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 TBC1D5Q92609 795 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 RNPC3Q96LT9 517 aaKnown RBP16.29■□□□□ 0.2
TREX1-202ENST00000444177 FAM161BQ96MY7 647 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
TREX1-202ENST00000444177 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
TREX1-202ENST00000444177 EDNRBP24530 442 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 PDE4DQ08499 809 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 ZNF697Q5TEC3 545 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 C16orf59Q7L2K0 433 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms