RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 TRPV6Q9H1D0 765 aa11.84□□□□□ -0.51
HDLBP-221ENST00000444092 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
HDLBP-221ENST00000444092 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-221ENST00000444092 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
HDLBP-221ENST00000444092 TRIP12Q14669 1992 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-221ENST00000444092 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
HDLBP-221ENST00000444092 UMODL1Q5DID0 1318 aa11.84□□□□□ -0.51
HDLBP-221ENST00000444092 SALL3Q9BXA9 1300 aa11.84□□□□□ -0.51
HDLBP-221ENST00000444092 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 NFIBO00712 420 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 B4GALT4O60513 344 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 MYL3P08590 195 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 FGRP09769 529 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 IGFBP4P22692 258 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 CPT1AP50416 773 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 PDE1AP54750 535 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 HAND2P61296 217 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
HDLBP-221ENST00000444092 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-221ENST00000444092 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 RNF207Q6ZRF8 634 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 MORC4Q8TE76 937 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 FAM227BQ96M60 508 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
HDLBP-221ENST00000444092 TCP11L1Q9NUJ3 509 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 CXXC1Q9P0U4 656 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-221ENST00000444092 PNMA2Q9UL42 364 aa11.83□□□□□ -0.52
HDLBP-221ENST00000444092 SPTBN5Q9NRC6 3674 aaKnown RBP11.83□□□□□ -0.52
HDLBP-221ENST00000444092 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 SUPT20HL2P0C7V6 817 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 HSPD1P10809 573 aaKnown RBP11.82□□□□□ -0.52
HDLBP-221ENST00000444092 PDHBP11177 359 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 RRP1P56182 461 aaKnown RBP11.82□□□□□ -0.52
HDLBP-221ENST00000444092 PDE4DQ08499 809 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 OR6J1Q8NGC5 347 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 SCLYQ96I15 445 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 TTC14Q96N46 770 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-221ENST00000444092 NKX2-4Q9H2Z4 354 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 SLC4A7Q9Y6M7 1214 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 TTC28Q96AY4 2481 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 MYH7BA7E2Y1 1941 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
HDLBP-221ENST00000444092 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 B4DLN1 442 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 MRPL12P52815 198 aaKnown RBP11.81□□□□□ -0.52
HDLBP-221ENST00000444092 NMIQ13287 307 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-221ENST00000444092 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 CCDC85BQ15834 202 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-221ENST00000444092 AKNAD1Q5T1N1 836 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 SLC30A10Q6XR72 485 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 CRBNQ96SW2 442 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-221ENST00000444092 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 PRDM6Q9NQX0 595 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 TRMT13Q9NUP7 481 aaKnown RBP11.81□□□□□ -0.52
HDLBP-221ENST00000444092 TNKSO95271 1327 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 CCDC171Q6TFL3 1326 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 RAD50Q92878 1312 aa11.81□□□□□ -0.52
HDLBP-221ENST00000444092 TCF20Q9UGU0 1960 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 NKRFO15226 690 aaKnown RBP eCLIP11.8□□□□□ -0.525e-8■□□□□ 8.8
HDLBP-221ENST00000444092 PFKMP08237 780 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 PCP11498 1178 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 CYP2C9P11712 490 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 RPS6P62753 249 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 PURAQ00577 322 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 ZNF543Q08ER8 600 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 USH1GQ495M9 461 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 ZNF589Q86UQ0 364 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 TICAM2Q86XR7 235 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 DNERQ8NFT8 737 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 SCFD2Q8WU76 684 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 CLEC4DQ8WXI8 215 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 THEGQ9P2T0 379 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 YBX2Q9Y2T7 364 aaKnown RBP11.8□□□□□ -0.52
HDLBP-221ENST00000444092 LAMA4Q16363 1823 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 TANC1Q9C0D5 1861 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
HDLBP-221ENST00000444092 KPNA6O60684 536 aa11.79□□□□□ -0.52
HDLBP-221ENST00000444092 TXNP10599 105 aaKnown RBP11.79□□□□□ -0.52
HDLBP-221ENST00000444092 ACTN1P12814 892 aa11.79□□□□□ -0.52
HDLBP-221ENST00000444092 RABGGTBP53611 331 aa11.79□□□□□ -0.52
HDLBP-221ENST00000444092 CHMP4BP1P59074 171 aa11.79□□□□□ -0.52
HDLBP-221ENST00000444092 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-221ENST00000444092 ADGRE1Q14246 886 aa11.79□□□□□ -0.52
HDLBP-221ENST00000444092 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
HDLBP-221ENST00000444092 GPATCH4Q5T3I0 446 aaKnown RBP11.79□□□□□ -0.52
HDLBP-221ENST00000444092 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms