RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 VASPP50552 380 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ANAPC15P60006 121 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 BAATQ14032 418 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PPP2R5BQ15173 497 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RTN1Q16799 776 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 NECAB2Q7Z6G3 386 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CCDC144CPQ8IYA2 1237 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SAMD3Q8N6K7 520 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FANCBQ8NB91 859 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ARRDC4Q8NCT1 418 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 DNERQ8NFT8 737 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MTMR8Q96EF0 704 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TCEANC2Q96MN5 208 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PIGSQ96S52 555 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 USP26Q9BXU7 913 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PCDHA1Q9Y5I3 950 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RXRAP19793 462 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 METAP2P50579 478 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ALDH5A1P51649 535 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RPS6P62753 249 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CNTN2Q02246 1040 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SLC30A10Q6XR72 485 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 Q6ZUG5 572 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TMTC3Q6ZXV5 915 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SPC25Q9HBM1 224 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 VTA1Q9NP79 307 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MAP3K20Q9NYL2 800 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
HLA-DQB1-206ENST00000443574 NID2Q14112 1375 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 DNM1LO00429 736 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CFBP00751 764 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PDE4DQ08499 809 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ACVR2BQ13705 512 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RNF180Q86T96 592 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FBXL16Q8N461 479 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TRPV1Q8NER1 839 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 BRF1Q92994 677 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 XPNPEP3Q9NQH7 507 aa11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
HLA-DQB1-206ENST00000443574 hCG_1984214I3L0E3 225 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CYTH3O43739 400 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 PLEKHA8P1O95397 391 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 PRAMEF19Q5SWL8 479 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 LHX8Q68G74 356 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 ZNF713Q8N859 430 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 NSUN6Q8TEA1 469 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 PIBF1Q8WXW3 757 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CUL5Q93034 780 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 PAWRQ96IZ0 340 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 FGD4Q96M96 766 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 C11orf49Q9H6J7 331 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CNTNAP5Q8WYK1 1306 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 MKI67P46013 3256 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 GCOM1H8Y6P7 765 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CPA1P15085 419 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 GHRHRQ02643 423 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CCDC144BQ3MJ40 725 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 AGXT2Q9BYV1 514 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 UPF2Q9HAU5 1272 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 BRPF3Q9ULD4 1205 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
HLA-DQB1-206ENST00000443574 SYNRGQ9UMZ2 1314 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 HSD17B4P51659 736 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 ANKRD1Q15327 319 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 ANO1Q5XXA6 986 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 UBE2Q1Q7Z7E8 422 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 FBXO16Q8IX29 292 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 CCDC82Q8N4S0 544 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 SMARCC2Q8TAQ2 1214 aa11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 SYTL5Q8TDW5 730 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-206ENST00000443574 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms