RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 CXXC1Q9P0U4 656 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-219ENST00000442714 ADD3Q9UEY8 706 aaKnown RBP11.96□□□□□ -0.49
HDLBP-219ENST00000442714 PNMA2Q9UL42 364 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 CHD9Q3L8U1 2897 aa11.96□□□□□ -0.5
HDLBP-219ENST00000442714 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 COL11A1P12107 1806 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-219ENST00000442714 ZMYM6O95789 1325 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 UMODL1Q5DID0 1318 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-219ENST00000442714 B4GALT4O60513 344 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 PCP11498 1178 aaKnown RBP11.95□□□□□ -0.5
HDLBP-219ENST00000442714 SDSP20132 328 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 ALDH5A1P51649 535 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-219ENST00000442714 CCL23P55773 120 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 HAND2P61296 217 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 AAMPQ13685 434 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 PSRC1Q6PGN9 363 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-219ENST00000442714 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 ALDH8A1Q9H2A2 487 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-219ENST00000442714 OSBPL3Q9H4L5 887 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 TOMM22Q9NS69 142 aa11.95□□□□□ -0.5
HDLBP-219ENST00000442714 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 IGHDP01880 384 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 EDNRBP24530 442 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 PURAQ00577 322 aaKnown RBP11.94□□□□□ -0.5
HDLBP-219ENST00000442714 RNF207Q6ZRF8 634 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 RPUSD2Q8IZ73 545 aaKnown RBP11.94□□□□□ -0.5
HDLBP-219ENST00000442714 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 MAF1Q9H063 256 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-219ENST00000442714 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
HDLBP-219ENST00000442714 CCDC171Q6TFL3 1326 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 A6NJR5 290 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 ZNF213O14771 459 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 SUPT20HL2P0C7V6 817 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 CALML3P27482 149 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 RPS6P62753 249 aaKnown RBP11.93□□□□□ -0.5
HDLBP-219ENST00000442714 OTOP2Q7RTS6 562 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 TBC1D10CQ8IV04 446 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 USP38Q8NB14 1042 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 DNERQ8NFT8 737 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 RILPL2Q969X0 211 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
HDLBP-219ENST00000442714 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
HDLBP-219ENST00000442714 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 NKRFO15226 690 aaKnown RBP eCLIP11.92□□□□□ -0.51e-8■■□□□ 12.2
HDLBP-219ENST00000442714 KPNA6O60684 536 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 NT5C2P49902 561 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 CPT1AP50416 773 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 MFAP1P55081 439 aaKnown RBP11.92□□□□□ -0.5
HDLBP-219ENST00000442714 NUCB1Q02818 461 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 NBPF20Q3BBV1 942 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
HDLBP-219ENST00000442714 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 SLC30A10Q6XR72 485 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 CHD1LQ86WJ1 897 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 ESR2Q92731 530 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
HDLBP-219ENST00000442714 ZKSCAN3Q9BRR0 538 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-219ENST00000442714 RNF41Q9H4P4 317 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-219ENST00000442714 PRDM12Q9H4Q4 367 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 ZSWIM5Q9P217 1185 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 MYH7P12883 1935 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 MYH8P13535 1937 aa11.92□□□□□ -0.5
HDLBP-219ENST00000442714 MYL3P08590 195 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 TXNP10599 105 aaKnown RBP11.91□□□□□ -0.5
HDLBP-219ENST00000442714 CYP2C9P11712 490 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 PDE4DQ08499 809 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 RAB30Q15771 203 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 CCDC178Q5BJE1 867 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 NFRKBQ6P4R8 1299 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 SCFD2Q8WU76 684 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 COPS5Q92905 334 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 SCLYQ96I15 445 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 CPVLQ9H3G5 476 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 PRDM6Q9NQX0 595 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-219ENST00000442714 YBX2Q9Y2T7 364 aaKnown RBP11.91□□□□□ -0.5
HDLBP-219ENST00000442714 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 PLXNA1Q9UIW2 1896 aa11.91□□□□□ -0.5
HDLBP-219ENST00000442714 TNKSO95271 1327 aa11.9□□□□□ -0.5
HDLBP-219ENST00000442714 B4DLN1 442 aa11.9□□□□□ -0.5
HDLBP-219ENST00000442714 KDM4AO75164 1064 aa11.9□□□□□ -0.5
HDLBP-219ENST00000442714 MRPL12P52815 198 aaKnown RBP11.9□□□□□ -0.5
HDLBP-219ENST00000442714 RABGGTBP53611 331 aa11.9□□□□□ -0.5
HDLBP-219ENST00000442714 PTPN11Q06124 597 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-219ENST00000442714 BRDTQ58F21 947 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-219ENST00000442714 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms