RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 INF2Q27J81 1249 aa15.72■□□□□ 0.11
MCF2L-218ENST00000442625 ANKRD40Q6AI12 368 aa15.72■□□□□ 0.11
MCF2L-218ENST00000442625 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
MCF2L-218ENST00000442625 NSUN4Q96CB9 384 aaKnown RBP15.72■□□□□ 0.11
MCF2L-218ENST00000442625 DISP2A7MBM2 1401 aa15.72■□□□□ 0.11
MCF2L-218ENST00000442625 ZSCAN5CA6NGD5 496 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 USP17L8P0C7I0 530 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 TRAPPC10P48553 1259 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 CKAP4Q07065 602 aaKnown RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 PDCLQ13371 301 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 RCSD1Q6JBY9 416 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 TTI2Q6NXR4 508 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 AENQ8WTP8 325 aaKnown RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 MS4A14Q96JA4 679 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 CAPS2Q9BXY5 557 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 TTYH3Q9C0H2 523 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 FAM207AQ9NSI2 230 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 ESYT3A0FGR9 886 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 TARSL2A2RTX5 802 aaKnown RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 CYLC1P35663 651 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 LONP1P36776 959 aaKnown RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 MTIF2P46199 727 aaKnown RBP15.71■□□□□ 0.11
MCF2L-218ENST00000442625 KCNQ4P56696 695 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 CCDC178Q5BJE1 867 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 EFCAB13Q8IY85 973 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 SALL4Q9UJQ4 1053 aa15.71■□□□□ 0.11
MCF2L-218ENST00000442625 GRIN2DO15399 1336 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 ZNF335Q9H4Z2 1342 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-218ENST00000442625 IPO7O95373 1038 aaKnown RBP15.7■□□□□ 0.1
MCF2L-218ENST00000442625 SRGNP10124 158 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 KIF5AQ12840 1032 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 STK4Q13043 487 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 MEA1Q16626 185 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 TTMPQ5BVD1 217 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 DTHD1Q6ZMT9 781 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 TMC4Q7Z404 712 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 DYNLL2Q96FJ2 89 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 SGSM3Q96HU1 749 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 CNOT6LQ96LI5 555 aaKnown RBP15.7■□□□□ 0.1
MCF2L-218ENST00000442625 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 CPVLQ9H3G5 476 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 ZNHIT6Q9NWK9 470 aaKnown RBP15.7■□□□□ 0.1
MCF2L-218ENST00000442625 CACNA1SQ13698 1873 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 CCDC194A0A1B0GVG4 234 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 SHOX2O60902 331 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-218ENST00000442625 KRT14P02533 472 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 SIK1P57059 783 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 RNASE9P60153 205 aaKnown RBP15.7■□□□□ 0.1
MCF2L-218ENST00000442625 C2CD5Q86YS7 1000 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 MCM9Q9NXL9 1143 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 FAM184BQ9ULE4 1060 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 ABCA3Q99758 1704 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 TAF1P21675 1872 aa15.7■□□□□ 0.1
MCF2L-218ENST00000442625 ERLIN2O94905 339 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 UBA7P41226 1012 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 DNM2P50570 870 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 TFAP4Q01664 338 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 UBE4AQ14139 1066 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 ARL6IP4Q66PJ3 421 aaKnown RBP15.69■□□□□ 0.1
MCF2L-218ENST00000442625 HEATR3Q7Z4Q2 680 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 SPATA4Q8NEY3 305 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 CCDC42Q96M95 316 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 NOC4LQ9BVI4 516 aaKnown RBP15.69■□□□□ 0.1
MCF2L-218ENST00000442625 SNX12Q9UMY4 172 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 PCDHA4Q9UN74 947 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 A0A1W2PQC6 194 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 EBAG9O00559 213 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 PSMA7O14818 248 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 BUB1O43683 1085 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 ORC4O43929 436 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 ZEB2O60315 1214 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 PYM1Q9BRP8 204 aaKnown RBP15.69■□□□□ 0.1
MCF2L-218ENST00000442625 CRNKL1Q9BZJ0 848 aaKnown RBP15.69■□□□□ 0.1
MCF2L-218ENST00000442625 IL17RBQ9NRM6 502 aa15.69■□□□□ 0.1
MCF2L-218ENST00000442625 XIRP1Q702N8 1843 aaKnown RBP15.69■□□□□ 0.1
MCF2L-218ENST00000442625 A0A087WUV0 522 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-218ENST00000442625 USP17L3A6NCW0 530 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 USP17L4A6NCW7 530 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 GOLGA8HP0CJ92 632 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 MCM3P25205 808 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 EEF1GP26641 437 aaKnown RBP15.68■□□□□ 0.1
MCF2L-218ENST00000442625 APBA1Q02410 837 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 SLC35G1Q2M3R5 365 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 MIIPQ5JXC2 388 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 USP17L1Q7RTZ2 530 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 CCDC155Q8N6L0 562 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 PNMA1Q8ND90 353 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 ARHGAP20Q9P2F6 1191 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-218ENST00000442625 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-218ENST00000442625 FAM153BP0C7A2 387 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 TRADDQ15628 312 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 ZKSCAN8Q15776 578 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-218ENST00000442625 FAM153CQ494X1 144 aa15.68■□□□□ 0.1
MCF2L-218ENST00000442625 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms