RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 AXDND1Q5T1B0 1012 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 ARRDC4Q8NCT1 418 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 SLAIN1Q8ND83 568 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 CCDC12Q8WUD4 166 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 ACAD9Q9H845 621 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 NYAP2Q9P242 653 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 TACC3Q9Y6A5 838 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 WDR19Q8NEZ3 1342 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 CACNA1SQ13698 1873 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 SHMT1P34896 483 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 METAP2P50579 478 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 CCT2P78371 535 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 SPATC1LQ9H0A9 340 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 MTMR4Q9NYA4 1195 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 RTEL1Q9NZ71 1219 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 AFG3L2Q9Y4W6 797 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 MYH2Q9UKX2 1941 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 USP27XA6NNY8 438 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 RASA1P20936 1047 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 NLRP5P59047 1200 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 SBK1Q52WX2 424 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 DNAJC5GQ8N7S2 189 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZBED3Q96IU2 234 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 MROH8Q9H579 483 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 TMX2Q9Y320 296 aa8.39□□□□□ -1.07
CDC42BPA-208ENST00000442054 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 EVI5O60447 810 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 NMT2O60551 498 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 CDKL5O76039 1030 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 CAVIN2O95810 425 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 GNRH1P01148 92 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 LRRC8AQ8IWT6 810 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 JMYQ8N9B5 988 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 FERMT2Q96AC1 680 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 DNAJC25Q9H1X3 360 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 MLXIPQ9HAP2 919 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 PCDHA1Q9Y5I3 950 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 A0A1W2PQ27 194 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 A0A1W2PQ64 194 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 A0A1W2PQD8 194 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 STRNO43815 780 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 FARP2O94887 1054 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 APOBRQ0VD83 1088 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 NOL9Q5SY16 702 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 SEPT14Q6ZU15 432 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 CCDC186Q7Z3E2 898 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 STAG1Q8WVM7 1258 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 TMEM47Q9BQJ4 181 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 MYL10Q9BUA6 226 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 AMNQ9BXJ7 453 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 A0A0G2JLL6 359 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 KIF28PB7ZC32 967 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 SORBS3O60504 671 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 PGK2P07205 417 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 PRKAR2AP13861 404 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 CYP2C19P33261 490 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 RNF207Q6ZRF8 634 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 PRRT2Q7Z6L0 340 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 RNF180Q86T96 592 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 LINC00301Q8NCQ3 95 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 TNMDQ9H2S6 317 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 HPSEQ9Y251 543 aa8.38□□□□□ -1.07
CDC42BPA-208ENST00000442054 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZRSR1Q15695 479 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 NECAB2Q7Z6G3 386 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 PCDHA7Q9UN72 937 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 LAMB1P07942 1786 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 MYH6P13533 1939 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 BACH1O14867 736 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 INHAP05111 366 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 GLT1D1Q96MS3 346 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 SLC26A6Q9BXS9 759 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 ATP11BQ9Y2G3 1177 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 HMGCRP04035 888 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 ADORA2AP29274 412 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 GPR142Q7Z601 462 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 DCAF4Q8WV16 495 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 TMEM87BQ96K49 555 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 MAP3K14Q99558 947 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 SENP6Q9GZR1 1112 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
CDC42BPA-208ENST00000442054 TAF1P21675 1872 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 A0A087WWV3 80 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ASB14A6NK59 587 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms