RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 IWS1Q96ST2 819 aa13□□□□□ -0.33
NELFE-205ENST00000441998 AMNQ9BXJ7 453 aa13□□□□□ -0.33
NELFE-205ENST00000441998 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
NELFE-205ENST00000441998 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 E7EWF7 191 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 ARVCFO00192 962 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 ADCY6O43306 1168 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 KPNA6O60684 536 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 FAAP100Q0VG06 881 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 BRDTQ58F21 947 aaPredicted RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 FAM109BQ6ICB4 259 aaPredicted RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 TLK2Q86UE8 772 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 FBXO11Q86XK2 927 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 LENG1Q96BZ8 264 aaPredicted RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 JMJD4Q9H9V9 463 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 TMEM39AQ9NV64 488 aa12.99□□□□□ -0.33
NELFE-205ENST00000441998 ZNFX1Q9P2E3 1918 aaKnown RBP12.99□□□□□ -0.33
NELFE-205ENST00000441998 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 ZBTB5O15062 677 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 TLR3O15455 904 aaKnown RBP12.98□□□□□ -0.33
NELFE-205ENST00000441998 DYNC1LI2O43237 492 aaPredicted RBP12.98□□□□□ -0.33
NELFE-205ENST00000441998 RAG1P15918 1043 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 CALML3P27482 149 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 CPT1AP50416 773 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 PDE4DQ08499 809 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 TROAPQ12815 778 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 CYB5R4Q7L1T6 521 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 WDR11Q9BZH6 1224 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
NELFE-205ENST00000441998 POLR3EQ9NVU0 708 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 TBX21Q9UL17 535 aa12.98□□□□□ -0.33
NELFE-205ENST00000441998 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.97□□□□□ -0.33
NELFE-205ENST00000441998 SOX1O00570 391 aaPredicted RBP12.97□□□□□ -0.33
NELFE-205ENST00000441998 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
NELFE-205ENST00000441998 TIMP1P01033 207 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 GRM4Q14833 912 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 WTAPQ15007 396 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 SLC30A10Q6XR72 485 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 FBXO16Q8IX29 292 aaPredicted RBP12.97□□□□□ -0.33
NELFE-205ENST00000441998 SYTL5Q8TDW5 730 aaPredicted RBP12.97□□□□□ -0.33
NELFE-205ENST00000441998 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 BADQ92934 168 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 VTI1AQ96AJ9 217 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 PDGFCQ9NRA1 345 aa12.97□□□□□ -0.33
NELFE-205ENST00000441998 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
NELFE-205ENST00000441998 DNAH12Q6ZR08 3092 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 A6NJR5 290 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
NELFE-205ENST00000441998 EIF3JO75822 258 aaKnown RBP12.96□□□□□ -0.33
NELFE-205ENST00000441998 CD4P01730 458 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 KIF5BP33176 963 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 MCM5P33992 734 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 LIFRP42702 1097 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 HSD17B4P51659 736 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 STXBP2Q15833 593 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 USH1GQ495M9 461 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 MFSD5Q6N075 450 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 FAM126BQ8IXS8 530 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 MB21D2Q8IYB1 491 aaPredicted RBP12.96□□□□□ -0.33
NELFE-205ENST00000441998 STAG2Q8N3U4 1231 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 TMEM87BQ96K49 555 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 PURBQ96QR8 312 aaKnown RBP12.96□□□□□ -0.33
NELFE-205ENST00000441998 ESYT1Q9BSJ8 1104 aa12.96□□□□□ -0.33
NELFE-205ENST00000441998 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
NELFE-205ENST00000441998 ALPK3Q96L96 1907 aa12.96□□□□□ -0.34
NELFE-205ENST00000441998 SZT2Q5T011 3432 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 PNMA6FA0A0J9YX94 578 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 DDAH1O94760 285 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 NEFLP07196 543 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 SUPT20HL2P0C7V6 817 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 GNAQP50148 359 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
NELFE-205ENST00000441998 FPGSQ05932 587 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 PPP2R5BQ15173 497 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 NECTIN1Q15223 517 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 TEX2Q8IWB9 1127 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms