RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MLXIPLQ9NP71 852 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 CNOT8Q9UFF9 292 aaKnown RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 CEP131Q9UPN4 1083 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 V9GY48 417 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 USP6P35125 1406 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 CTNND1O60716 968 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SLC8A1P32418 973 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 INHBEP58166 350 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 PIK3AP1Q6ZUJ8 805 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 MARCH10Q8NA82 808 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 APPBP2Q92624 585 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SPAG5Q96R06 1193 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 TUBGCP2Q9BSJ2 902 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SLC39A2Q9NP94 309 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 STRN4Q9NRL3 753 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 LIMA1Q9UHB6 759 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SALL4Q9UJQ4 1053 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SUGT1Q9Y2Z0 365 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 PCDHA13Q9Y5I0 950 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 DLC1Q96QB1 1528 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 NCAPD2Q15021 1401 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 XIRP1Q702N8 1843 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 ERICH2A1L162 156 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SNAP23O00161 211 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 PRKAB2O43741 272 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 RPN1P04843 607 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 STAT6P42226 847 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 ELF3P78545 371 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 PDIA6Q15084 440 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 NTRK3Q16288 839 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 SPATS2Q86XZ4 545 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 KANSL2Q9H9L4 492 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 LRRC4CQ9HCJ2 640 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 PANK4Q9NVE7 773 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 EVI5O60447 810 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 TRIM14Q14142 442 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 WTAPQ15007 396 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 AKAP4Q5JQC9 854 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 NT5DC1Q5TFE4 455 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 BZW1Q7L1Q6 419 aaKnown RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 TTC5Q8N0Z6 440 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 MMGT1Q8N4V1 131 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 TRIM58Q8NG06 486 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 RASGRP4Q8TDF6 673 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 AGAP11Q8TF27 550 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 CUL5Q93034 780 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 GSDMAQ96QA5 445 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 ARMT1Q9H993 441 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 ACTR5Q9H9F9 607 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-214ENST00000441542 ATP6V0A4Q9HBG4 840 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 LY9Q9HBG7 655 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
HDAC9-214ENST00000441542 LGALS16A8MUM7 142 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 TMCO5BA8MYB1 307 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 EPHB6O15197 1021 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 RAD51CO43502 376 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 RTN2O75298 545 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 HOXB7P09629 217 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 SLC1A4P43007 532 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 SLCO1A2P46721 670 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 KIF11P52732 1056 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 MRPL12P52815 198 aaKnown RBP8.3□□□□□ -1.08
HDAC9-214ENST00000441542 KCNJ2P63252 427 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 CACNA2D4Q7Z3S7 1137 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 CCDC155Q8N6L0 562 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 SLC17A8Q8NDX2 589 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 IQSEC3Q9UPP2 1182 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-214ENST00000441542 AMOTL2Q9Y2J4 779 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 FAM237AA0A1B0GTK4 181 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 EYA2O00167 538 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
HDAC9-214ENST00000441542 MAP3K12Q12852 859 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 ITGB3BPQ13352 177 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-214ENST00000441542 RBBP5Q15291 538 aaKnown RBP8.3□□□□□ -1.08
HDAC9-214ENST00000441542 CCDC57Q2TAC2 916 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 CFAP221Q4G0U5 840 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 IRF2BP1Q8IU81 584 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 IQCKQ8N0W5 287 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 WASF1Q92558 559 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 MTMR8Q96EF0 704 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 SH3GL3Q99963 347 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 EXOC1Q9NV70 894 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 RWDD2AQ9UIY3 292 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 ITIH6Q6UXX5 1313 aa8.3□□□□□ -1.08
HDAC9-214ENST00000441542 CEP104O60308 925 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 FMNL1O95466 1100 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 FLT3P36888 993 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 IL15P40933 162 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-214ENST00000441542 RANBP1P43487 201 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 ADCY1Q08828 1119 aa8.29□□□□□ -1.08
HDAC9-214ENST00000441542 PRPF4BQ13523 1007 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms