RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IFT88Q13099 833 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 CCDC152Q4G0S7 254 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 CFAP58Q5T655 872 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 SDR42E1Q8WUS8 393 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 SH2D4AQ9H788 454 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 USO1O60763 962 aaKnown RBP22.53■■□□□ 1.2
SHOX2-203ENST00000441443 ZPR1O75312 459 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 VEGFAP15692 232 aaPredicted RBP22.53■■□□□ 1.2
SHOX2-203ENST00000441443 HDLBPQ00341 1268 aaKnown RBP22.53■■□□□ 1.2
SHOX2-203ENST00000441443 PCDHA13Q9Y5I0 950 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 DISP2A7MBM2 1401 aa22.53■■□□□ 1.2
SHOX2-203ENST00000441443 GLI1P08151 1106 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 ENAHQ8N8S7 591 aaPredicted RBP22.52■■□□□ 1.2
SHOX2-203ENST00000441443 CAVIN3Q969G5 261 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 TSGA10Q9BZW7 698 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 CHD4Q14839 1912 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 PSMA7O14818 248 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 GYG1P46976 350 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 TTI2Q6NXR4 508 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 C2CD5Q86YS7 1000 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 HYOU1Q9Y4L1 999 aa22.52■■□□□ 1.2
SHOX2-203ENST00000441443 CAMTA2O94983 1202 aa22.52■■□□□ 1.19
SHOX2-203ENST00000441443 FGFR2P21802 821 aa22.52■■□□□ 1.19
SHOX2-203ENST00000441443 MTIF2P46199 727 aaKnown RBP22.52■■□□□ 1.19
SHOX2-203ENST00000441443 DDR1Q08345 913 aa22.52■■□□□ 1.19
SHOX2-203ENST00000441443 SF3B2Q13435 895 aaKnown RBP22.52■■□□□ 1.19
SHOX2-203ENST00000441443 GIMAP7Q8NHV1 300 aa22.52■■□□□ 1.19
SHOX2-203ENST00000441443 FAM212AQ96EL1 285 aa22.52■■□□□ 1.19
SHOX2-203ENST00000441443 CCT8L2Q96SF2 557 aa22.52■■□□□ 1.19
SHOX2-203ENST00000441443 MYH13Q9UKX3 1938 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 RDXP35241 583 aaKnown RBP22.51■■□□□ 1.19
SHOX2-203ENST00000441443 PAFAH1B1P43034 410 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 CHRNDQ07001 517 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 BANK1Q8NDB2 785 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 DUSP9Q99956 384 aaKnown RBP22.51■■□□□ 1.19
SHOX2-203ENST00000441443 NUP58Q9BVL2 599 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 ARHGAP20Q9P2F6 1191 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 SALL4Q9UJQ4 1053 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 NR1D1P20393 614 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 NLRP5P59047 1200 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 ACTN3Q08043 901 aaPredicted RBP22.51■■□□□ 1.19
SHOX2-203ENST00000441443 FAM98CQ17RN3 349 aaKnown RBP22.51■■□□□ 1.19
SHOX2-203ENST00000441443 KDM7AQ6ZMT4 941 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 MICALCLQ6ZW33 695 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 ZNF572Q7Z3I7 529 aaPredicted RBP22.51■■□□□ 1.19
SHOX2-203ENST00000441443 CNOT6LQ96LI5 555 aaKnown RBP22.51■■□□□ 1.19
SHOX2-203ENST00000441443 EPB41L5Q9HCM4 733 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 KLC4Q9NSK0 619 aa22.51■■□□□ 1.19
SHOX2-203ENST00000441443 A6NNZ2 444 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 PPP1R37O75864 691 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 ITIH3Q06033 890 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 PTGISQ16647 500 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 TUBB8Q3ZCM7 444 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 NAALADL2Q58DX5 795 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 IQCKQ8N0W5 287 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 NOC4LQ9BVI4 516 aaKnown RBP22.5■■□□□ 1.19
SHOX2-203ENST00000441443 RNF41Q9H4P4 317 aaPredicted RBP22.5■■□□□ 1.19
SHOX2-203ENST00000441443 ATXN2Q99700 1313 aaKnown RBP22.5■■□□□ 1.19
SHOX2-203ENST00000441443 TCP1P17987 556 aaKnown RBP22.5■■□□□ 1.19
SHOX2-203ENST00000441443 GUCY2DQ02846 1103 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 IFIT1BQ5T764 474 aaKnown RBP22.5■■□□□ 1.19
SHOX2-203ENST00000441443 CCDC13Q8IYE1 715 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 SPATA31A1Q5TZJ5 1347 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 RTL9Q8NET4 1388 aa22.5■■□□□ 1.19
SHOX2-203ENST00000441443 BUB1O43683 1085 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 RCAN1P53805 252 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 CCDC40Q4G0X9 1142 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 C3orf67Q6ZVT6 689 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 CATIPQ7Z7H3 387 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 NLRP14Q86W24 1093 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 MYCBPAPQ8TBZ2 947 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 ESR2Q92731 530 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 PYM1Q9BRP8 204 aaKnown RBP22.49■■□□□ 1.19
SHOX2-203ENST00000441443 DISC1Q9NRI5 854 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 E7EVH7 732 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 CHUKO15111 745 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 HPDP32754 393 aaPredicted RBP22.49■■□□□ 1.19
SHOX2-203ENST00000441443 EIF4A3P38919 411 aaKnown RBP22.49■■□□□ 1.19
SHOX2-203ENST00000441443 KIF11P52732 1056 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 TRADDQ15628 312 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 SPATS2Q86XZ4 545 aaKnown RBP22.49■■□□□ 1.19
SHOX2-203ENST00000441443 CYP2D7A0A087X1C5 515 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 EPHB6O15197 1021 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 KLRC4O43908 158 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 PPANQ9NQ55 473 aaKnown RBP22.49■■□□□ 1.19
SHOX2-203ENST00000441443 FAM207AQ9NSI2 230 aaPredicted RBP22.49■■□□□ 1.19
SHOX2-203ENST00000441443 JAG2Q9Y219 1238 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 NUP98P52948 1817 aa22.49■■□□□ 1.19
SHOX2-203ENST00000441443 AKR1B10O60218 316 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 MYCNP04198 464 aaPredicted RBP22.48■■□□□ 1.19
SHOX2-203ENST00000441443 PRLRP16471 622 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 CYP7A1P22680 504 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 ANKRD40Q6AI12 368 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 RETREG2Q8NC44 543 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 RUBCNQ92622 972 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 ALS2CR12Q96Q35 445 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 ZSCAN10Q96SZ4 725 aaPredicted RBP22.48■■□□□ 1.19
SHOX2-203ENST00000441443 VCPKMTQ9H867 229 aa22.48■■□□□ 1.19
SHOX2-203ENST00000441443 HEXIM1O94992 359 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms