RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 IRX6P78412 446 aaPredicted RBP6□□□□□ -1.45
PTPN4-206ENST00000441089 CCINQ13939 588 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 RASA3Q14644 834 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 C20orf194Q5TEA3 1177 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 TTLL5Q6EMB2 1281 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 HFE2Q6ZVN8 426 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 KRT25Q7Z3Z0 450 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 ANKRD23Q86SG2 305 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 PARK7Q99497 189 aaKnown RBP6□□□□□ -1.45
PTPN4-206ENST00000441089 C2orf49Q9BVC5 232 aaPredicted RBP6□□□□□ -1.45
PTPN4-206ENST00000441089 MXD3Q9BW11 206 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 COA1Q9GZY4 146 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 VEZTQ9HBM0 779 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 PRKAG2Q9UGJ0 569 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 GABRQQ9UN88 632 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 ZNF318Q5VUA4 2279 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 LTBP2Q14767 1821 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 MAST2Q6P0Q8 1798 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 FAM196BA6NMK8 535 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 F8W735 103 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-206ENST00000441089 PDHXO00330 501 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 TARSP26639 723 aaKnown RBP5.99□□□□□ -1.45
PTPN4-206ENST00000441089 IRAK1P51617 712 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 GP2P55259 537 aaKnown RBP5.99□□□□□ -1.45
PTPN4-206ENST00000441089 SEC13P55735 322 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 PPIL2Q13356 520 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 AAK1Q2M2I8 961 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 AKNAD1Q5T1N1 836 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 WFDC8Q8IUA0 241 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 STAG2Q8N3U4 1231 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPN4-206ENST00000441089 IFT43Q96FT9 208 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 AKTIPQ9H8T0 292 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 FRRS1LQ9P0K9 344 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 OGDHLQ9ULD0 1010 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 MYH3P11055 1940 aa5.99□□□□□ -1.45
PTPN4-206ENST00000441089 SPEF2Q9C093 1822 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 CLRN2A0PK11 232 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L15C9J2P7 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L10C9JJH3 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L13C9JLJ4 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L12C9JPN9 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L11C9JVI0 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L21D6R901 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L18D6R9N7 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L22D6RA61 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L17D6RBQ6 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L19D6RCP7 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L20D6RJB6 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 TNPO2O14787 897 aaKnown RBP5.98□□□□□ -1.45
PTPN4-206ENST00000441089 HMGCRP04035 888 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 RLBP1P12271 317 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 TNNI2P48788 182 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 USP17L24Q0WX57 530 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 PTK7Q13308 1070 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 ALDH1L2Q3SY69 923 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 Q6ZS46 218 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 COPS6Q7L5N1 327 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 DHX32Q7L7V1 743 aaKnown RBP5.98□□□□□ -1.45
PTPN4-206ENST00000441089 COA7Q96BR5 231 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 HOOK2Q96ED9 719 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 FAM89AQ96GI7 184 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 PNMA5Q96PV4 448 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 SMG9Q9H0W8 520 aaKnown RBP5.98□□□□□ -1.45
PTPN4-206ENST00000441089 SMC4Q9NTJ3 1288 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 GTF3C3Q9Y5Q9 886 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 ACACBO00763 2458 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 PFASO15067 1338 aa5.98□□□□□ -1.45
PTPN4-206ENST00000441089 PRRC2BQ5JSZ5 2229 aaKnown RBP5.97□□□□□ -1.45
PTPN4-206ENST00000441089 IRS4O14654 1257 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-206ENST00000441089 HOXB7P09629 217 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 COL6A1P12109 1028 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 PPATQ06203 517 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 SHHQ15465 462 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 LRRC26Q2I0M4 334 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 CFAP100Q494V2 611 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 CCDC152Q4G0S7 254 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 CRTC2Q53ET0 693 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-206ENST00000441089 G2E3Q7L622 706 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 LRP10Q7Z4F1 713 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 ANKRD18AQ8IVF6 992 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 ZNF428Q96B54 188 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 UBL7Q96S82 380 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-206ENST00000441089 KRTAP4-2Q9BYR5 136 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 KCNH6Q9H252 994 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 EPHX3Q9H6B9 360 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 NOB1Q9ULX3 412 aaKnown RBP5.97□□□□□ -1.45
PTPN4-206ENST00000441089 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
PTPN4-206ENST00000441089 KMT2BQ9UMN6 2715 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 MAP3K6O95382 1288 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 ANXA1P04083 346 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 TRIM27P14373 513 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 EIF2S2P20042 333 aaKnown RBP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 SPINK2P20155 84 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 INPP5BP32019 993 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 CCT4P50991 539 aaKnown RBP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 RBM5P52756 815 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 GPLD1P80108 840 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 FZD5Q13467 585 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 HIF1AQ16665 826 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms