RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SH3TC2Q8TF17 1288 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 USP6NLQ92738 828 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PLEKHA8P1O95397 391 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 DEXIO95424 95 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SLC25A27O95847 323 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ALAS1P13196 640 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 KIF5BP33176 963 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 OAZ1P54368 228 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 GRB14Q14449 540 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CMTR1Q8N1G2 835 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PIBF1Q8WXW3 757 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MROH8Q9H579 483 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 RNF146Q9NTX7 359 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CYTH3O43739 400 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ADCY3O60266 1144 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MYCP01106 439 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ICAM1P05362 532 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PGK2P07205 417 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 FDX1P10109 184 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 XBP1P17861 261 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ADORA2AP29274 412 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PRMT2P55345 433 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MAP2K5Q13163 448 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CCL14Q16627 93 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 QRICH1Q2TAL8 776 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MUM1L1Q5H9M0 696 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 KRT40Q6A162 431 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 LEO1Q8WVC0 666 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MMP19Q99542 508 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 RNF26Q9BY78 433 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TFIP11Q9UBB9 837 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
TNFRSF1A-204ENST00000440083 COBLO75128 1261 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ZNF445P59923 1031 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TRIM32Q13049 653 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 IRF5Q13568 498 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 USH1GQ495M9 461 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SLC9C1Q4G0N8 1177 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ZNFX1Q9P2E3 1918 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 FCER1AP12319 257 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 COPB2P35606 906 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 RGS2P41220 211 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CCDC183Q5T5S1 534 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TRIB2Q92519 343 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PIGSQ96S52 555 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MAP3K14Q99558 947 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 APBA2Q99767 749 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 FLRT1Q9NZU1 646 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
TNFRSF1A-204ENST00000440083 hCG_1642624A0A1W2PR95 340 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 NFIBO00712 420 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 GRK4P32298 578 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 GNAQP50148 359 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 KCTD2Q14681 263 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CCDC82Q8N4S0 544 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 SLAIN1Q8ND83 568 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CHST13Q8NET6 341 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 RIOX1Q9H6W3 641 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ACAD9Q9H845 621 aa16.66■□□□□ 0.26
TNFRSF1A-204ENST00000440083 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 INHAP05111 366 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CEBPZQ03701 1054 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 DPP9Q86TI2 863 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CLEC4DQ8WXI8 215 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 ZNF333Q96JL9 665 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 USP28Q96RU2 1077 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 CNTNAP5Q8WYK1 1306 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
TNFRSF1A-204ENST00000440083 LCTP09848 1927 aa16.64■□□□□ 0.26
TNFRSF1A-204ENST00000440083 STRNO43815 780 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 HOXC6P09630 235 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms