RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 LRRIQ3A6PVS8 624 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 CCNE1P24864 410 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 ZNF804AQ7Z570 1209 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 GPCPD1Q9NPB8 672 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 ZNHIT6Q9NWK9 470 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 ROBO1Q9Y6N7 1651 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 A0A1W2PQC6 194 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 SLC37A4O43826 429 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 TNNT3P45378 269 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 GRAPQ13588 217 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 MIIPQ5JXC2 388 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 TRAPPC11Q7Z392 1133 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 GRAPLQ8TC17 118 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 CD209Q9NNX6 404 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 RAD21O60216 631 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 KRT25Q7Z3Z0 450 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 REXO1Q8N1G1 1221 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 CNBD1Q8NA66 436 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 DAGLBQ8NCG7 672 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 CAGE1Q8TC20 777 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 DHTKD1Q96HY7 919 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 MYO1AQ9UBC5 1043 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 LRWD1Q9UFC0 647 aa15.13■□□□□ 0.01
HERPUD1-204ENST00000439977 MYMKA6NI61 221 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 ZNF263O14978 683 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 GSTO1P78417 241 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 TTYH3Q9C0H2 523 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 KANSL2Q9H9L4 492 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 PDE2AO00408 941 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 GNA11P29992 359 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 UBE2SQ16763 222 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 CCDC96Q2M329 555 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 HNRNPLLQ8WVV9 542 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 CCDC47Q96A33 483 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 CALML4Q96GE6 196 aa15.12■□□□□ 0.01
HERPUD1-204ENST00000439977 PSMD14O00487 310 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 KRT86O43790 486 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 LDHCP07864 332 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 CXCR5P32302 372 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 PRPHP41219 470 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 MATR3P43243 847 aaKnown RBP eCLIP15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 TNNI2P48788 182 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 PPP4CP60510 307 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 KRT83P78385 493 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 SKIDA1Q1XH10 827 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 GALNT17Q6IS24 598 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 CCDC42Q96M95 316 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 TBC1D7Q9P0N9 293 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 SSBP05455 408 aaKnown RBP eCLIP15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 CYLC1P35663 651 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 RAD51AP2Q09MP3 1159 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 GPS2Q13227 327 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 GRB10Q13322 594 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 CALCRLQ16602 461 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 KCNK18Q7Z418 384 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 CDK5RAP3Q96JB5 506 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 SPZ1Q9BXG8 430 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 MLXIPQ9HAP2 919 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 SMARCAL1Q9NZC9 954 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 CALCOCO1Q9P1Z2 691 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 LEMD3Q9Y2U8 911 aa15.11■□□□□ 0.01
HERPUD1-204ENST00000439977 BICDL2A1A5D9 508 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 LAD1O00515 517 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 SLC16A2P36021 539 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 C2orf54Q08AI8 447 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 FKBP15Q5T1M5 1219 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 C16orf86Q6ZW13 317 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 SV2BQ7L1I2 683 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 NEDD1Q8NHV4 660 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 BLOC1S4Q9NUP1 217 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 FAM193AP78312 1265 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 ZBED6P86452 979 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 TUBB2AQ13885 445 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 MEA1Q16626 185 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 AK8Q96MA6 479 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 C7orf25Q9BPX7 421 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 TUBB2BQ9BVA1 445 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 TANGO6Q9C0B7 1094 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 DNA2P51530 1060 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 CACNB1Q02641 598 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 ZSCAN26Q16670 478 aa15.1■□□□□ 0.01
HERPUD1-204ENST00000439977 MYL1P05976 194 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 MYBL2P10244 700 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 KIF5AQ12840 1032 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
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