RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SELENOSQ9BQE4 189 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 PLEKHA4Q9H4M7 779 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 L2HGDHQ9H9P8 463 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 MAGEF1Q9HAY2 307 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 SH2B2O14492 632 aaPredicted RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 GJA8P48165 433 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 DNM2P50570 870 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 RASA3Q14644 834 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 UBE3CQ15386 1083 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 TSNAXIP1Q2TAA8 658 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 IQCF2Q8IXL9 164 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 AFAP1L2Q8N4X5 818 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 TRIM58Q8NG06 486 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 SMCR8Q8TEV9 937 aaPredicted RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 RAB17Q9H0T7 212 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 PCDHGA4Q9Y5G9 962 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 NEURL4Q96JN8 1562 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 GTPBP6O43824 516 aaPredicted RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 GAS8O95995 478 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 MMP1P03956 469 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 IRX4P78413 519 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 PTGDRQ13258 359 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 LETM2Q2VYF4 491 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 WDR44Q5JSH3 913 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 NCAPH2Q6IBW4 605 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 TYW1BQ6NUM6 668 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 MKL1Q969V6 931 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 FAXDC2Q96IV6 333 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 NT5C3AQ9H0P0 336 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 UTP6Q9NYH9 597 aaKnown RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 RFX7Q2KHR2 1363 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 PXDNLA1KZ92 1463 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 ENO4A6NNW6 628 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 FAM163BP0C2L3 166 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 IFNAR1P17181 557 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 CNGA1P29973 690 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 SMTNP53814 917 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 PPARDQ03181 441 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 ST3GAL1Q11201 340 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 MAP7Q14244 749 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 ARHGEF25Q86VW2 580 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 C2CD5Q86YS7 1000 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 WDR66Q8TBY9 1149 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 VCX3BQ9H321 246 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 FAM207AQ9NSI2 230 aaPredicted RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 ATG3Q9NT62 314 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 SUN2Q9UH99 717 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 DIS3Q9Y2L1 958 aaKnown RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 PCDHB6Q9Y5E3 794 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 CAPN7Q9Y6W3 813 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 NRKQ7Z2Y5 1582 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 MAP2P11137 1827 aaKnown RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 KIF28PB7ZC32 967 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 TRAF5O00463 557 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 MFAP3LO75121 409 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 VCAM1P19320 739 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 TNFAIP3P21580 790 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 ATP1A2P50993 1020 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 PLCB3Q01970 1234 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 SHC4Q6S5L8 630 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 EFCAB13Q8IY85 973 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 UBLCP1Q8WVY7 318 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 MCM9Q9NXL9 1143 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 SUGT1Q9Y2Z0 365 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 SRPRBQ9Y5M8 271 aaKnown RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 USP31Q70CQ4 1352 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 CD163L1Q9NR16 1453 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 TLDC2A0PJX2 215 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 EME2A4GXA9 379 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 GOLGA8KD6RF30 607 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 PDE8AO60658 829 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 RPN1P04843 607 aaKnown RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 EEF2P13639 858 aaKnown RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 H2AFXP16104 143 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 TNNI2P48788 182 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 IFT88Q13099 833 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 RAPGEF1Q13905 1077 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 SEPT6Q14141 434 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 ASIC2Q16515 512 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 EEF2KMTQ96G04 330 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 RUNDC3BQ96NL0 473 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 IRX2Q9BZI1 471 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 TRIM4Q9C037 500 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 ADGRG1Q9Y653 693 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 FAM169AQ9Y6X4 670 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 TNKSO95271 1327 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 PLEKHG1Q9ULL1 1385 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 MROH2AA6NES4 1674 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 A0A087WUV0 522 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 ANKRD33BA6NCL7 494 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 SKAP2O75563 359 aaPredicted RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 CTDNEP1O95476 244 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 GCFC2P16383 781 aaKnown RBP6.98□□□□□ -1.29
BDNF-211ENST00000439476 PTPREP23469 700 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 PPARAQ07869 468 aa6.98□□□□□ -1.29
BDNF-211ENST00000439476 MAP3K21Q5TCX8 1036 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms