RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 COPB1P53618 953 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 CORO7P57737 925 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 SNAP25P60880 206 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 LRRC41Q15345 812 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 CYP26C1Q6V0L0 522 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 TMEM260Q9NX78 707 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 WDR19Q8NEZ3 1342 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PPP1R12BO60237 982 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 RPN1P04843 607 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 IRAK1P51617 712 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 CDR1P51861 262 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 SPA17Q15506 151 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC43Q96MW1 224 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 PIGSQ96S52 555 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 LBHD1Q9BQE6 289 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 BPIFA3Q9BQP9 254 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 PHF20Q9BVI0 1012 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 ANKRD2Q9GZV1 360 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 FAM205AQ6ZU69 1335 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 GOLGA6L7A0A1B0GV03 622 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 SYF2O95926 243 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 PRCPP42785 496 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 NAA25Q14CX7 972 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 MMS22LQ6ZRQ5 1243 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 CSGALNACT2Q8N6G5 542 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 FERMT2Q96AC1 680 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC114Q96M63 670 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 TACO1Q9BSH4 297 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 NFU1Q9UMS0 254 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 TTF2Q9UNY4 1162 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 TLDC2A0PJX2 215 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 RCCD1A6NED2 376 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 BUB1BO60566 1050 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 FTCDO95954 541 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 PARP1P09874 1014 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 TRADDQ15628 312 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC42Q96M95 316 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 EXOC1Q9NV70 894 aa11.04□□□□□ -0.64
CDC42SE1-202ENST00000439374 HSF2BPO75031 334 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 GUCY2DQ02846 1103 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 KIF5AQ12840 1032 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 NAA35Q5VZE5 725 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 MCTP2Q6DN12 878 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 FBXL16Q8N461 479 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 TMEM47Q9BQJ4 181 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 CXorf56Q9H5V9 222 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 MKRN1Q9UHC7 482 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 USP21Q9UK80 565 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 STK36Q9NRP7 1315 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 ATP8B1O43520 1251 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 NEBLO76041 1014 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 CALML3P27482 149 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 TMTC1Q8IUR5 882 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 NCAPGQ9BPX3 1015 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 ADD3Q9UEY8 706 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 PSMA7O14818 248 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 UPP2O95045 317 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC91Q7Z6B0 441 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-202ENST00000439374 TUBB4AP04350 444 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 TBX2Q13207 712 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 UBE2SQ16763 222 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 CABP7Q86V35 215 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 NELFCDQ8IXH7 590 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 ATP8A2Q9NTI2 1148 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 A0A1B0GTH6 734 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 NKRFO15226 690 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 KRT86O43790 486 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 LDHCP07864 332 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 PRPF4BQ13523 1007 aaKnown RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 WHAMMP3Q1A5X7 153 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 CFAP58Q5T655 872 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 DPP8Q6V1X1 898 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 N4BP2L2Q92802 583 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 XDHP47989 1333 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms