RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
NEK1-201ENST00000439128 LMNB1P20700 586 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 KCNJ6P48051 423 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 PFDN4Q9NQP4 134 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 HSPA4P34932 840 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 SLC9C1Q4G0N8 1177 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 ZMYM4Q5VZL5 1548 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
NEK1-201ENST00000439128 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
NEK1-201ENST00000439128 ZNF569Q5MCW4 686 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 DCAF4Q8WV16 495 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 RMDN3Q96TC7 470 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
NEK1-201ENST00000439128 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 MEIS1O00470 390 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 TFAMQ00059 246 aaKnown RBP13.31□□□□□ -0.28
NEK1-201ENST00000439128 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
NEK1-201ENST00000439128 SRRTQ9BXP5 876 aaKnown RBP13.31□□□□□ -0.28
NEK1-201ENST00000439128 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 SPATA31E1Q6ZUB1 1445 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 CFAP157Q5JU67 520 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 SMC1BQ8NDV3 1235 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 IFT81Q8WYA0 676 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 ESPNB1AK53 854 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 PPM1KQ8N3J5 372 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 URGCPQ8TCY9 931 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 TBCKQ8TEA7 893 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 GJA10Q969M2 543 aa13.31□□□□□ -0.28
NEK1-201ENST00000439128 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 GIPC1O14908 333 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 N4BP1O75113 896 aaKnown RBP13.3□□□□□ -0.28
NEK1-201ENST00000439128 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 LMCD1Q9NZU5 365 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 GOLGA6BA6NDN3 693 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 GOLGA6DP0CG33 693 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 CYP2D6P10635 497 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 CYP2B6P20813 491 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 SLC17A8Q8NDX2 589 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 GOLGA6AQ9NYA3 693 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 TWF2Q6IBS0 349 aaKnown RBP13.3□□□□□ -0.28
NEK1-201ENST00000439128 NME8Q8N427 588 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 FAM107BQ9H098 131 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
NEK1-201ENST00000439128 ADGRB3O60242 1522 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 BTBD18B2RXH4 712 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
NEK1-201ENST00000439128 AFG3L2Q9Y4W6 797 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 PSMD14O00487 310 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 ITIH3Q06033 890 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 ME3Q16798 604 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 SFMBT2Q5VUG0 894 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 GIMAP8Q8ND71 665 aaPredicted RBP13.3□□□□□ -0.28
NEK1-201ENST00000439128 MIS12Q9H081 205 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 NLRC4Q9NPP4 1024 aa13.3□□□□□ -0.28
NEK1-201ENST00000439128 CCL15-CCL14A0A0B4J2E2 113 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 CCL15Q16663 113 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 MAP7D1Q3KQU3 841 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 MLKLQ8NB16 471 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 TBC1D16Q8TBP0 767 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 MROH7-TTC4A0A0A0MT08 1334 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 hCG_1984214I3L0E3 225 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 PDE6CP51160 858 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 GPR161Q8N6U8 529 aaKnown RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 ZNF713Q8N859 430 aaPredicted RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 NAP1L3Q99457 506 aaPredicted RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 FAM207AQ9NSI2 230 aaPredicted RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 SLC12A6Q9UHW9 1150 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 CPDO75976 1380 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 MTMR2Q13614 643 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 TRIM14Q14142 442 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 NUP58Q9BVL2 599 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 ALKQ9UM73 1620 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 CUL4BQ13620 913 aa13.29□□□□□ -0.28
NEK1-201ENST00000439128 TSTA3Q13630 321 aaPredicted RBP13.29□□□□□ -0.28
NEK1-201ENST00000439128 PLCB4Q15147 1175 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms