RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
CSTF3-203ENST00000438862 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
CSTF3-203ENST00000438862 SCN5AQ14524 2016 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 ASB14A6NK59 587 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 RAD21O60216 631 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 IL9P15248 144 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 PSMC6P62333 389 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 CPXCR1Q8N123 301 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 UPF3BQ9BZI7 483 aaKnown RBP13.41□□□□□ -0.26
CSTF3-203ENST00000438862 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSTF3-203ENST00000438862 ANTXR1Q9H6X2 564 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
CSTF3-203ENST00000438862 COL4A4P53420 1690 aaPredicted RBP13.4□□□□□ -0.26
CSTF3-203ENST00000438862 TNKSO95271 1327 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 CYP2D6P10635 497 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 CYP2C9P11712 490 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 KCNJ6P48051 423 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 CDK8P49336 464 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
CSTF3-203ENST00000438862 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 SDR42E1Q8WUS8 393 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 SUGCTQ9HAC7 445 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
CSTF3-203ENST00000438862 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
CSTF3-203ENST00000438862 ZNF318Q5VUA4 2279 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 SMPD1P17405 629 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 OAZ1P54368 228 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 SLC9C2Q5TAH2 1124 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 HFE2Q6ZVN8 426 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 AMOTL1Q8IY63 956 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 FAM133AQ8N9E0 248 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 PRRX2Q99811 253 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 CCDC8Q9H0W5 538 aaPredicted RBP13.39□□□□□ -0.27
CSTF3-203ENST00000438862 ATP8A2Q9NTI2 1148 aa13.39□□□□□ -0.27
CSTF3-203ENST00000438862 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 USP17L21D6R901 530 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 SURF6O75683 361 aaKnown RBP13.38□□□□□ -0.27
CSTF3-203ENST00000438862 PTPN5P54829 565 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 ERVK-21P61565 698 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 CNTN2Q02246 1040 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 BFSP2Q13515 415 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 C16orf86Q6ZW13 317 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 NEK9Q8TD19 979 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 TGS1Q96RS0 853 aaKnown RBP13.38□□□□□ -0.27
CSTF3-203ENST00000438862 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 RAVER2Q9HCJ3 691 aaKnown RBP13.38□□□□□ -0.27
CSTF3-203ENST00000438862 CTNNA3Q9UI47 895 aa13.38□□□□□ -0.27
CSTF3-203ENST00000438862 LCHNA4D1U4 455 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 F5H6K3 240 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 FDX1P10109 184 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 PDE6AP16499 860 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 KLRC3Q07444 240 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 PKN1Q16512 942 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 LRRFIP1Q32MZ4 808 aaKnown RBP13.37□□□□□ -0.27
CSTF3-203ENST00000438862 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 EAF2Q96CJ1 260 aaPredicted RBP13.37□□□□□ -0.27
CSTF3-203ENST00000438862 KCNK17Q96T54 332 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 RAD9AQ99638 391 aa13.37□□□□□ -0.27
CSTF3-203ENST00000438862 TLR7Q9NYK1 1049 aaKnown RBP13.37□□□□□ -0.27
CSTF3-203ENST00000438862 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 ZP2Q05996 745 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 PTPN11Q06124 597 aaPredicted RBP13.36□□□□□ -0.27
CSTF3-203ENST00000438862 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSTF3-203ENST00000438862 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
CSTF3-203ENST00000438862 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 NOP58Q9Y2X3 529 aaKnown RBP13.36□□□□□ -0.27
CSTF3-203ENST00000438862 USP34Q70CQ2 3546 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
CSTF3-203ENST00000438862 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 CPT1AP50416 773 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 WDR5P61964 334 aaKnown RBP13.35□□□□□ -0.27
CSTF3-203ENST00000438862 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
CSTF3-203ENST00000438862 NFRKBQ6P4R8 1299 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 KIAA1211Q6ZU35 1233 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
CSTF3-203ENST00000438862 TET1Q8NFU7 2136 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
CSTF3-203ENST00000438862 VTA1Q9NP79 307 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 PDGFCQ9NRA1 345 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 FEM1BQ9UK73 627 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 MTUS1Q9ULD2 1270 aa13.35□□□□□ -0.27
CSTF3-203ENST00000438862 PTPRSQ13332 1948 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms