RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CRACR2BQ8N4Y2 399 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 MMP19Q99542 508 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 MTA3Q9BTC8 594 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 EPB41L4AQ9HCS5 686 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 PCDHA5Q9Y5H7 936 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 TRBV23OR9-2A0A075B6M9 112 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 A0A1W2PQ27 194 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 A0A1W2PQ64 194 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 A0A1W2PQC6 194 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 A0A1W2PQD8 194 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 NOP56O00567 594 aaKnown RBP5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 KCNH1O95259 989 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 GLI4P10075 376 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 PAMP19021 973 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 CDR1P51861 262 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 FXNQ16595 210 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 GTF2IRD2BQ6EKJ0 949 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 MRM1Q6IN84 353 aaKnown RBP5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 GTF2IRD2Q86UP8 949 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 IGDCC3Q8IVU1 814 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 MZB1Q8WU39 189 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 NKX2-4Q9H2Z4 354 aa5.32□□□□□ -1.56
HMGB3P12-201ENST00000438745 C7orf72A4D263 438 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 NUDT19A8MXV4 375 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 ARNTLO00327 626 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 KLF4O43474 513 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 SUSD5O60279 629 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 SCG5P05408 212 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 ZSCAN22P10073 491 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 FBLN1P23142 703 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 HOXC12P31275 282 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 DNAJA1P31689 397 aaKnown RBP5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 EPHB3P54753 998 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 TESK1Q15569 626 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 CIAPIN1Q6FI81 312 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 CPNE8Q86YQ8 564 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 TMEFF1Q8IYR6 380 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 SIGLEC10Q96LC7 697 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 GPRC5CQ9NQ84 441 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 CNOT6Q9ULM6 557 aaKnown RBP5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 KCTD3Q9Y597 815 aa5.31□□□□□ -1.56
HMGB3P12-201ENST00000438745 NPHP3-ACAD11A0A0J9YXS1 232 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 B2RBV5 119 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 DDAH1O94760 285 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 GJB6O95452 261 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 ITGAVP06756 1048 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 PLS3P13797 630 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 IGFBP6P24592 240 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 SCRN1Q12765 414 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 SSPNQ14714 243 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 PLEKHN1Q494U1 663 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 ZNF385BQ569K4 471 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 LARP1BQ659C4 914 aaKnown RBP5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 ZC3H14Q6PJT7 736 aaKnown RBP5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 TMC6Q7Z403 805 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 KREMEN2Q8NCW0 462 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 NPLOC4Q8TAT6 608 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 FRS2Q8WU20 508 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 DACT3Q96B18 629 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 LGR4Q9BXB1 951 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 EPN3Q9H201 632 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 FBLN5Q9UBX5 448 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 ADAMTS20P59510 1910 aa5.3□□□□□ -1.56
HMGB3P12-201ENST00000438745 ERCC6Q03468 1493 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 NUAK1O60285 661 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 THBDP07204 575 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 RBM10P98175 930 aaKnown RBP5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 CAP1Q01518 475 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 MBLAC2Q68D91 279 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 BICRALQ6AI39 1079 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 ZNF227Q86WZ6 799 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 FAM129CQ86XR2 697 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 LZTR1Q8N653 840 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 CELF2-AS1Q8N7Q2 184 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 PLEKHO2Q8TD55 490 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 PANK1Q8TE04 598 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 DPF3Q92784 378 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 IRF2BPLQ9H1B7 796 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 HCFC2Q9Y5Z7 792 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 IRAK3Q9Y616 596 aa5.29□□□□□ -1.56
HMGB3P12-201ENST00000438745 A0A1W2PQJ5 194 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 F8W031 263 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 TBX1O43435 398 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 NPHS1O60500 1241 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 PRR5P85299 388 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 INF2Q27J81 1249 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 SV2CQ496J9 727 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 E4F1Q66K89 784 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 IQCEQ6IPM2 695 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 ANKS3Q6ZW76 656 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 GULP1Q9UBP9 304 aa5.28□□□□□ -1.56
HMGB3P12-201ENST00000438745 ZC3H12DA2A288 527 aaKnown RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 NACADO15069 1562 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 BUB1BO60566 1050 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 CPP00450 1065 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 TACR1P25103 407 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms