RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 GTF2A2P52657 109 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 OAZ1P54368 228 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 NAPAP54920 295 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 NLRP5P59047 1200 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 RGMBQ6NW40 437 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 NOSTRINQ8IVI9 506 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 TEX2Q8IWB9 1127 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 BLIDQ8IZY5 108 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 BRI3BPQ8WY22 251 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 RIC8AQ9NPQ8 531 aa11.14□□□□□ -0.63
CUBN-204ENST00000438254 ISY1Q9ULR0 285 aaKnown RBP11.14□□□□□ -0.63
CUBN-204ENST00000438254 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 MEIS2O14770 477 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 EDIL3O43854 480 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 CNMDO75829 334 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 CETPP11597 493 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 GNA11P29992 359 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
CUBN-204ENST00000438254 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
CUBN-204ENST00000438254 TRAF1Q13077 416 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 TMEM132BQ14DG7 1078 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 SAFBQ15424 915 aaKnown RBP eCLIP11.13□□□□□ -0.63
CUBN-204ENST00000438254 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 GADL1Q6ZQY3 521 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 ANKRD23Q86SG2 305 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 PLPP6Q8IY26 295 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 CLEC4DQ8WXI8 215 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 P2RX7Q99572 595 aaKnown RBP11.13□□□□□ -0.63
CUBN-204ENST00000438254 PTPN18Q99952 460 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 ASCC2Q9H1I8 757 aaPredicted RBP11.13□□□□□ -0.63
CUBN-204ENST00000438254 HOXC10Q9NYD6 342 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 PCDHA6Q9UN73 950 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 PCDHA8Q9Y5H6 950 aa11.13□□□□□ -0.63
CUBN-204ENST00000438254 ABCB11O95342 1321 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 CCL15-CCL14A0A0B4J2E2 113 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 BTBD19C9JJ37 291 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 PSEN2P49810 448 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 HERVK_113P62684 666 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 CCL15Q16663 113 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 CCDC174Q6PII3 467 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 RAVER2Q9HCJ3 691 aaKnown RBP11.12□□□□□ -0.63
CUBN-204ENST00000438254 C6orf50Q9HD87 102 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
CUBN-204ENST00000438254 BTBD7Q9P203 1132 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
CUBN-204ENST00000438254 WNT7AO00755 349 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 ZBED4O75132 1171 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 ZNF157P51786 506 aaPredicted RBP11.11□□□□□ -0.63
CUBN-204ENST00000438254 ADCY7P51828 1080 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
CUBN-204ENST00000438254 USH1GQ495M9 461 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
CUBN-204ENST00000438254 FAM43AQ8N2R8 423 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 MB21D1Q8N884 522 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 BICD2Q8TD16 824 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 CUL5Q93034 780 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 USP28Q96RU2 1077 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 MAF1Q9H063 256 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 PSTPIP2Q9H939 334 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 ZCCHC17Q9NP64 241 aaKnown RBP11.11□□□□□ -0.63
CUBN-204ENST00000438254 CCPG1Q9ULG6 757 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
CUBN-204ENST00000438254 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 MORC2Q9Y6X9 1032 aaPredicted RBP11.11□□□□□ -0.63
CUBN-204ENST00000438254 TCHHQ07283 1943 aa11.11□□□□□ -0.63
CUBN-204ENST00000438254 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
CUBN-204ENST00000438254 ADGRA2Q96PE1 1338 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
CUBN-204ENST00000438254 RASSF10A6NK89 507 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 PDHXO00330 501 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 MCM4P33991 863 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 TRAPPC10P48553 1259 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 NASPP49321 788 aaPredicted RBP11.1□□□□□ -0.63
CUBN-204ENST00000438254 HSD17B4P51659 736 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 MRPL12P52815 198 aaKnown RBP11.1□□□□□ -0.63
CUBN-204ENST00000438254 KRT85P78386 507 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 UBE2SQ16763 222 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 MUM1L1Q5H9M0 696 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
CUBN-204ENST00000438254 SAMD3Q8N6K7 520 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 TBC1D5Q92609 795 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 GBP4Q96PP9 640 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 TEX13BQ9BXU2 312 aa11.1□□□□□ -0.63
CUBN-204ENST00000438254 FTOQ9C0B1 505 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms