RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 KBTBD13C9JR72 458 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 ADAMTS4O75173 837 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 EDNRBP24530 442 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 RNF180Q86T96 592 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 SAMD3Q8N6K7 520 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 FANCBQ8NB91 859 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 SYTL5Q8TDW5 730 aaPredicted RBP20.66■□□□□ 0.9
NCSTN-208ENST00000438008 TCEANC2Q96MN5 208 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 JAKMIP1Q96N16 626 aaKnown RBP20.66■□□□□ 0.9
NCSTN-208ENST00000438008 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
NCSTN-208ENST00000438008 VTA1Q9NP79 307 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 MAP3K20Q9NYL2 800 aaKnown RBP20.66■□□□□ 0.9
NCSTN-208ENST00000438008 NR2E3Q9Y5X4 410 aa20.66■□□□□ 0.9
NCSTN-208ENST00000438008 OPLAHO14841 1288 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 ADCY6O43306 1168 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 EVI5O60447 810 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 PGK1P00558 417 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 TAPT1Q6NXT6 567 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 APOA5Q6Q788 366 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 SYNE3Q6ZMZ3 975 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 FBXL16Q8N461 479 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 SRBD1Q8N5C6 995 aaKnown RBP20.65■□□□□ 0.9
NCSTN-208ENST00000438008 LENG1Q96BZ8 264 aaPredicted RBP20.65■□□□□ 0.9
NCSTN-208ENST00000438008 SENP6Q9GZR1 1112 aaPredicted RBP20.65■□□□□ 0.9
NCSTN-208ENST00000438008 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
NCSTN-208ENST00000438008 LCTP09848 1927 aa20.65■□□□□ 0.9
NCSTN-208ENST00000438008 SYNRGQ9UMZ2 1314 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 B4DLN1 442 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 PLEKHA8P1O95397 391 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 RXRAP19793 462 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 PSMA5P28066 241 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 HSD17B4P51659 736 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 MRPL12P52815 198 aaKnown RBP20.64■□□□□ 0.89
NCSTN-208ENST00000438008 NKX3-2P78367 333 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 IQSEC1Q6DN90 963 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 KLHDC9Q8NEP7 349 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 RRP36Q96EU6 259 aaKnown RBP20.64■□□□□ 0.89
NCSTN-208ENST00000438008 TSEN34Q9BSV6 310 aaKnown RBP20.64■□□□□ 0.89
NCSTN-208ENST00000438008 UPF3AQ9H1J1 476 aaKnown RBP20.64■□□□□ 0.89
NCSTN-208ENST00000438008 COL20A1Q9P218 1284 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 BRPF3Q9ULD4 1205 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 PHF24Q9UPV7 400 aa20.64■□□□□ 0.89
NCSTN-208ENST00000438008 H0YGN5 161 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 CST5P28325 142 aaPredicted RBP20.63■□□□□ 0.89
NCSTN-208ENST00000438008 RCAN1P53805 252 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 GJA9P57773 515 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 TNFAIP2Q03169 654 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 TMTC3Q6ZXV5 915 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 EEPD1Q7L9B9 569 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 MICU3Q86XE3 530 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 FBXO16Q8IX29 292 aaPredicted RBP20.63■□□□□ 0.89
NCSTN-208ENST00000438008 TAAR1Q96RJ0 339 aa20.63■□□□□ 0.89
NCSTN-208ENST00000438008 GNEQ9Y223 722 aaKnown RBP20.63■□□□□ 0.89
NCSTN-208ENST00000438008 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.62■□□□□ 0.89
NCSTN-208ENST00000438008 RBM47A0AV96 593 aaKnown RBP20.62■□□□□ 0.89
NCSTN-208ENST00000438008 CFBP00751 764 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
NCSTN-208ENST00000438008 CPA1P15085 419 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 RPS6KB1P23443 525 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 ADCYAP1R1P41586 468 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 PDE4DQ08499 809 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 LRRC26Q2I0M4 334 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 CCSAPQ6IQ19 270 aaPredicted RBP20.62■□□□□ 0.89
NCSTN-208ENST00000438008 RAB11FIP4Q86YS3 637 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 NSUN6Q8TEA1 469 aaKnown RBP20.62■□□□□ 0.89
NCSTN-208ENST00000438008 IWS1Q96ST2 819 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 SPC25Q9HBM1 224 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 PDGFCQ9NRA1 345 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 RBM28Q9NW13 759 aaKnown RBP20.62■□□□□ 0.89
NCSTN-208ENST00000438008 Q9Y3F1 56 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 MCM3APO60318 1980 aa20.62■□□□□ 0.89
NCSTN-208ENST00000438008 ZBTB43O43298 467 aa20.61■□□□□ 0.89
NCSTN-208ENST00000438008 SMPD1P17405 629 aa20.61■□□□□ 0.89
NCSTN-208ENST00000438008 RMDN3Q96TC7 470 aa20.61■□□□□ 0.89
NCSTN-208ENST00000438008 AGXT2Q9BYV1 514 aa20.61■□□□□ 0.89
NCSTN-208ENST00000438008 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
NCSTN-208ENST00000438008 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 MOXD2PA6NHM9 499 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 FGD1P98174 961 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 SNX17Q15036 470 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 C1orf53Q5VUE5 145 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 SLC39A5Q6ZMH5 540 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 Q6ZUG5 572 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 CMTR1Q8N1G2 835 aaKnown RBP20.6■□□□□ 0.89
NCSTN-208ENST00000438008 PIBF1Q8WXW3 757 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 TM6SF1Q9BZW5 370 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 ZSWIM6Q9HCJ5 1215 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 LRRC37A2A6NM11 1700 aa20.6■□□□□ 0.89
NCSTN-208ENST00000438008 MYADML2A6NDP7 307 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 GCOM1H8Y6P7 765 aaPredicted RBP20.59■□□□□ 0.89
NCSTN-208ENST00000438008 CTAGE5O15320 804 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 C6orf222P0C671 652 aaPredicted RBP20.59■□□□□ 0.89
NCSTN-208ENST00000438008 POLR2MP0CAP2 368 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
NCSTN-208ENST00000438008 PPP2R5BQ15173 497 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 KCNA10Q16322 511 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 RTN1Q16799 776 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 DUSP28Q4G0W2 176 aa20.59■□□□□ 0.89
NCSTN-208ENST00000438008 C7orf61Q8IZ16 206 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms