RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 CERS4Q9HA82 394 aa12.96□□□□□ -0.33
COPS7B-212ENST00000436564 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
COPS7B-212ENST00000436564 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 CHGBP05060 677 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 SMPD1P17405 629 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 POU3F3P20264 500 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-212ENST00000436564 RASA1P20936 1047 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 PSMC6P62333 389 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
COPS7B-212ENST00000436564 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 REV3LO60673 3130 aa12.95□□□□□ -0.34
COPS7B-212ENST00000436564 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 DPYSL4O14531 572 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 SUPT20HL2P0C7V6 817 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 FDX1P10109 184 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 ACTN1P12814 892 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 ATP5JP18859 108 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 DEFB128Q7Z7B8 93 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-212ENST00000436564 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 ARNTL2Q8WYA1 636 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
COPS7B-212ENST00000436564 HLA-CQ95604 372 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 HAUS7Q99871 368 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
COPS7B-212ENST00000436564 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-212ENST00000436564 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
COPS7B-212ENST00000436564 Q9Y3F1 56 aa12.94□□□□□ -0.34
COPS7B-212ENST00000436564 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 TLL1O43897 1013 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 BMP3P12645 472 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 PTGS1P23219 599 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-212ENST00000436564 SBK1Q52WX2 424 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 PPP4R3BQ5MIZ7 849 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
COPS7B-212ENST00000436564 KRT40Q6A162 431 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 EEPD1Q7L9B9 569 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 LRRC47Q8N1G4 583 aaKnown RBP12.93□□□□□ -0.34
COPS7B-212ENST00000436564 MKL1Q969V6 931 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 PDGFCQ9NRA1 345 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
COPS7B-212ENST00000436564 TRMT13Q9NUP7 481 aaKnown RBP12.93□□□□□ -0.34
COPS7B-212ENST00000436564 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 GPR37L1O60883 481 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 HMMRO75330 724 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 TTLL1O95922 423 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 CYP2C9P11712 490 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 STAT2P52630 851 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 FBXO16Q8IX29 292 aaPredicted RBP12.92□□□□□ -0.34
COPS7B-212ENST00000436564 RPAP2Q8IXW5 612 aaPredicted RBP12.92□□□□□ -0.34
COPS7B-212ENST00000436564 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 VWCEQ96DN2 955 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 CEP95Q96GE4 821 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 SLC9A7Q96T83 725 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 SYNPO2Q9UMS6 1093 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 DDX49Q9Y6V7 483 aaKnown RBP12.92□□□□□ -0.34
COPS7B-212ENST00000436564 NCOR1O75376 2440 aa12.92□□□□□ -0.34
COPS7B-212ENST00000436564 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
COPS7B-212ENST00000436564 TNKSO95271 1327 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 RAB11FIP3O75154 756 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 PRDM1O75626 825 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 ALAS1P13196 640 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 TAP1Q03518 808 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 TAPT1Q6NXT6 567 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 GIMAP6Q6P9H5 292 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 CHURC1Q8WUH1 139 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
COPS7B-212ENST00000436564 FTOQ9C0B1 505 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPS7B-212ENST00000436564 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
COPS7B-212ENST00000436564 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
COPS7B-212ENST00000436564 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 RFC2P35250 354 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 TMEM63BQ5T3F8 832 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 HERC6Q8IVU3 1022 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
COPS7B-212ENST00000436564 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms