RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 OAZ1P54368 228 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 EPHB4P54760 987 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 SNAP25P60880 206 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 ACVR2BQ13705 512 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 SEC23AQ15436 765 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 KCNA10Q16322 511 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.37
HMGCL-204ENST00000436439 KCTD1Q719H9 257 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 ARMCX2Q7L311 632 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 IQCA1Q86XH1 822 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 GMCL1Q96IK5 515 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 KATNBL1Q9H079 304 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 LY9Q9HBG7 655 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 TOMM22Q9NS69 142 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
HMGCL-204ENST00000436439 NID2Q14112 1375 aa12.71□□□□□ -0.38
HMGCL-204ENST00000436439 ERICH2A1L162 156 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 RANBP6O60518 1105 aaKnown RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 PFKFB2O60825 505 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 LARGE1O95461 756 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 SLC1A4P43007 532 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 FAM109BQ6ICB4 259 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 NOL8Q76FK4 1167 aaKnown RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 CCDC144CPQ8IYA2 1237 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 STARD7Q9NQZ5 370 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 DDX49Q9Y6V7 483 aaKnown RBP12.7□□□□□ -0.38
HMGCL-204ENST00000436439 EYSQ5T1H1 3165 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 ASTN1O14525 1302 aa12.7□□□□□ -0.38
HMGCL-204ENST00000436439 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 IFIT3O14879 490 aaKnown RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 KIAA0355O15063 1070 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 CTAGE5O15320 804 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 PTGS1P23219 599 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 NOVP48745 357 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 APOBRQ0VD83 1088 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 WTAPQ15007 396 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 TMEM67Q5HYA8 995 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 FAM160B2Q86V87 743 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 CHURC1Q8WUH1 139 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ZSCAN10Q96SZ4 725 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ABHD16BQ9H3Z7 469 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 RNF146Q9NTX7 359 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 PRR12Q9ULL5 1215 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 MYH6P13533 1939 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 TNKSO95271 1327 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 MOXD2PA6NHM9 499 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 DLL1O00548 723 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 PLA2G6O60733 806 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ASGR1P07306 291 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 FDX1P10109 184 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ALAS1P13196 640 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 GJA9P57773 515 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 CCDC174Q6PII3 467 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ANKRD33Q7Z3H0 272 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 ENAHQ8N8S7 591 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
HMGCL-204ENST00000436439 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
HMGCL-204ENST00000436439 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 RAG1P15918 1043 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 CDK7P50613 346 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 ZNF697Q5TEC3 545 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 TTBK2Q6IQ55 1244 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
HMGCL-204ENST00000436439 LLPHQ9BRT6 129 aaKnown RBP12.68□□□□□ -0.38
HMGCL-204ENST00000436439 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
HMGCL-204ENST00000436439 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
HMGCL-204ENST00000436439 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
HMGCL-204ENST00000436439 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms