RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DNAJC7Q99615 494 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 TUBGCP2Q9BSJ2 902 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 POLLQ9UGP5 575 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 LUC7L2Q9Y383 392 aaKnown RBP11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 LDHCP07864 332 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 ERCC3P19447 782 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 TXKP42681 527 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 AMPD2Q01433 879 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 TRIM14Q14142 442 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 NEK8Q86SG6 692 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 TTYH3Q9C0H2 523 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 MYH1P12882 1939 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 EEF1GP26641 437 aaKnown RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 OAS2P29728 719 aaKnown RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 LRRC47Q8N1G4 583 aaKnown RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 RPGRQ92834 1020 aaKnown RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 SLC37A4O43826 429 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 ST5P78524 1137 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 P2RX5Q93086 422 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 GJA10Q969M2 543 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 NUDT12Q9BQG2 462 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 SLC39A2Q9NP94 309 aa11.64□□□□□ -0.55
CLSTN1-203ENST00000435891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 H3BQF6 201 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 LAD1O00515 517 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 TDP2O95551 362 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 SRGNP10124 158 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 PICALMQ13492 652 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 TTC31Q49AM3 519 aaPredicted RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 CNOT6LQ96LI5 555 aaKnown RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 LACRTQ9GZZ8 138 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 SEMA6BQ9H3T3 888 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 LCMT1Q9UIC8 334 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 DUSP10Q9Y6W6 482 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 A0A1W2PQC6 194 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 CCDC151A5D8V7 595 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 SRGAP2O75044 1071 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 PDHBP11177 359 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 IL1R1P14778 569 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 STIM1Q13586 685 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 CEP112Q8N8E3 955 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 UIMC1Q96RL1 719 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 C6orf50Q9HD87 102 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 EXOC1Q9NV70 894 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 JRKLQ9Y4A0 524 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 TAF1LQ8IZX4 1826 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 POTEMA6NI47 508 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 F8W031 263 aaPredicted RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 CCNE1P24864 410 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 VSNL1P62760 191 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 TBC1D8BQ0IIM8 1120 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 GRB10Q13322 594 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 BEND6Q5SZJ8 279 aaPredicted RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 REXO1Q8N1G1 1221 aaKnown RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 GGA1Q9UJY5 639 aa11.63□□□□□ -0.55
CLSTN1-203ENST00000435891 TRIM21P19474 475 aaKnown RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 CYP27A1Q02318 531 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 DYMQ7RTS9 669 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 DHTKD1Q96HY7 919 aaPredicted RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 C7orf25Q9BPX7 421 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 ABCB6Q9NP58 842 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MAGEC2Q9UBF1 373 aaPredicted RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MYMKA6NI61 221 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 EPHB6O15197 1021 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 ATP1A1P05023 1023 aaKnown RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MYL1P05976 194 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 PLEKP08567 350 aaPredicted RBP11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 GNA11P29992 359 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 DNM2P50570 870 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MCM6Q14566 821 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 AK8Q96MA6 479 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 PNMA5Q96PV4 448 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 ATP8B1O43520 1251 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 AKR1B1P15121 316 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 CRY2Q49AN0 593 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 SOGA3Q5TF21 947 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MSANTD4Q8NCY6 345 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 TBC1D16Q8TBP0 767 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms